RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 ACAD11Q709F0 780 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 SPATA2LQ8IUW3 424 aaPredicted RBP14.34□□□□□ -0.11
RAB40A-201ENST00000304236 IPMKQ8NFU5 416 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 SPATA22Q8NHS9 363 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 SEPT8Q92599 483 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 CNDP1Q96KN2 507 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 SUSD3Q96L08 255 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 CCDC28BQ9BUN5 200 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 FICDQ9BVA6 458 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 SLC39A8Q9C0K1 460 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 VCX3BQ9H321 246 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 CDH22Q9UJ99 828 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 EYSQ5T1H1 3165 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 CHD9Q3L8U1 2897 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 A0A087X1B8 175 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 WASH4PA8MWX3 477 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 DCXO43602 365 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 NEBLO76041 1014 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 PDHA1P08559 390 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 STMN1P16949 149 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 ITGAXP20702 1163 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 CD52P31358 61 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 GRIA4P48058 902 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 CUL3Q13618 768 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 AFMIDQ63HM1 303 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 KIAA0930Q6ICG6 404 aaPredicted RBP14.34□□□□□ -0.11
RAB40A-201ENST00000304236 DENND5AQ6IQ26 1287 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 LRRC8EQ6NSJ5 796 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 ARHGAP36Q6ZRI8 547 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 LRRTM3Q86VH5 581 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 TMEM151AQ8N4L1 468 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 OR10T2Q8NGX3 314 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 ADAMTS19Q8TE59 1207 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 SPDL1Q96EA4 605 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 FCRL2Q96LA5 508 aaPredicted RBP14.34□□□□□ -0.11
RAB40A-201ENST00000304236 RBM22Q9NW64 420 aaKnown RBP eCLIP14.34□□□□□ -0.11
RAB40A-201ENST00000304236 CPSF2Q9P2I0 782 aaKnown RBP14.34□□□□□ -0.11
RAB40A-201ENST00000304236 INSL6Q9Y581 213 aa14.34□□□□□ -0.11
RAB40A-201ENST00000304236 NLRC5Q86WI3 1866 aa14.33□□□□□ -0.11
RAB40A-201ENST00000304236 GOLGA8TH3BQL2 631 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 BAG2O95816 211 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 MT-CYBP00156 380 aaPredicted RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SLC35E2BP0CK96 405 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SERPINB5P36952 375 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 GRIK1P39086 918 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 ARCN1P48444 511 aaKnown RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 TUBP50607 506 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SLC5A3P53794 718 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 POU6F1Q14863 301 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 RALGPS1Q5JS13 557 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 KIAA0408Q6ZU52 694 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SLC41A1Q8IVJ1 513 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 DEFB107AQ8IZN7 70 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 PHTF2Q8N3S3 785 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 FBXW8Q8N3Y1 598 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 CPSF7Q8N684 471 aaKnown RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 RTL3Q8N8U3 475 aaKnown RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 ACVR1CQ8NER5 493 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SCAMP5Q8TAC9 235 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 FATE1Q969F0 183 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 C1orf74Q96LT6 269 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SERPINB11Q96P15 392 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 NR1H4Q96RI1 486 aaPredicted RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 TTC1Q99614 292 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 OXCT2Q9BYC2 517 aaPredicted RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 LMCD1Q9NZU5 365 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SCOCQ9UIL1 159 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 PCDHB8Q9UN66 801 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 PRUNE2Q8WUY3 3088 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 FAM95CA0A1B0GW59 222 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 LINC01553A4QN01 128 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 RGSL1A5PLK6 1076 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 MAGEA13PA6NCF6 341 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 TARM1B6A8C7 271 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 E9PBE3 544 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 TNFRSF10BO14763 440 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 PHGDHO43175 533 aaKnown RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 NPHS1O60500 1241 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 KLHL41O60662 606 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 VAPBO95292 243 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 PIGNO95427 931 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SBK3P0C264 359 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SLC2A3P11169 496 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SAT1P21673 171 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 GABRB3P28472 473 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 CD151P48509 253 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 ERVK-21P61565 698 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 DSG1Q02413 1049 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 PAN2Q504Q3 1202 aaKnown RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 ESRP1Q6NXG1 681 aaKnown RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 TMEM154Q6P9G4 183 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 C16orf89Q6UX73 402 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 TMC7Q7Z402 723 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SPRED2Q7Z698 418 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 FSTL5Q8N475 847 aaPredicted RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 C2CD4AQ8NCU7 369 aaPredicted RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 RP9Q8TA86 221 aaKnown RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 MAPK15Q8TD08 544 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 CALML6Q8TD86 181 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms