RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 GDAP1L1Q96MZ0 367 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 OSBPL1AQ9BXW6 950 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 ZDHHC6Q9H6R6 413 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 NHEJ1Q9H9Q4 299 aaPredicted RBP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 SPTLC3Q9NUV7 552 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 ANKRD11Q6UB99 2663 aaPredicted RBP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 SMG1Q96Q15 3661 aaKnown RBP11.4□□□□□ -0.58
CLCC1-201ENST00000302500 SCN8AQ9UQD0 1980 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 ASXL3Q9C0F0 2248 aa11.4□□□□□ -0.58
CLCC1-201ENST00000302500 MYLKQ15746 1914 aa11.4□□□□□ -0.59
CLCC1-201ENST00000302500 POM121BA6NF01 834 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 PRAMEF26H0Y7S4 382 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 PIGNO95427 931 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 EPHA8P29322 1005 aaPredicted RBP11.39□□□□□ -0.59
CLCC1-201ENST00000302500 PFN3P60673 137 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 SLC10A2Q12908 348 aaPredicted RBP11.39□□□□□ -0.59
CLCC1-201ENST00000302500 RALGDSQ12967 914 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 SETMARQ53H47 684 aaPredicted RBP11.39□□□□□ -0.59
CLCC1-201ENST00000302500 PPP6R3Q5H9R7 873 aaPredicted RBP11.39□□□□□ -0.59
CLCC1-201ENST00000302500 PRAMEF14Q5SWL7 426 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 KIAA1161Q6NSJ0 714 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 GDPD4Q6W3E5 623 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 TMEM139Q8IV31 216 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 LZTR1Q8N653 840 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 OR13H1Q8NG92 308 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 GANCQ8TET4 914 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 MAML1Q92585 1016 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 FATE1Q969F0 183 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 RAB7BQ96AH8 199 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 KLHL32Q96NJ5 620 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 ZNF599Q96NL3 588 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 MGME1Q9BQP7 344 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 FZD3Q9NPG1 666 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 UBA2Q9UBT2 640 aaPredicted RBP11.39□□□□□ -0.59
CLCC1-201ENST00000302500 IPO11Q9UI26 975 aaKnown RBP11.39□□□□□ -0.59
CLCC1-201ENST00000302500 KLF15Q9UIH9 416 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 KNTC1P50748 2209 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 APC2O95996 2303 aa11.39□□□□□ -0.59
CLCC1-201ENST00000302500 LY6G6EA0A0G2JKS1 128 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 ZNF487B1APH4 448 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 KRIT1O00522 736 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 FLRT2O43155 660 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 HTRA2O43464 458 aaPredicted RBP11.38□□□□□ -0.59
CLCC1-201ENST00000302500 TSPAN6O43657 245 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 MFSD11O43934 449 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 H2AFZP0C0S5 128 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 HNRNPA2B1P22626 353 aaKnown RBP11.38□□□□□ -0.59
CLCC1-201ENST00000302500 MMP12P39900 470 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 RHOAP61586 193 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 GALNT2Q10471 571 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 RFTN1Q14699 578 aaPredicted RBP11.38□□□□□ -0.59
CLCC1-201ENST00000302500 TEAD4Q15561 434 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 TMEM52BQ4KMG9 183 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 LRRC73Q5JTD7 316 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 KYAT3Q6YP21 454 aaKnown RBP11.38□□□□□ -0.59
CLCC1-201ENST00000302500 H2AFVQ71UI9 128 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 VPS36Q86VN1 386 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 ZSCAN30Q86W11 494 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 SLC25A45Q8N413 288 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 PLD5Q8N7P1 536 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 TP53I13Q8NBR0 393 aaPredicted RBP11.38□□□□□ -0.59
CLCC1-201ENST00000302500 SLC35G2Q8TBE7 412 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 ADAMTS14Q8WXS8 1223 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 RAPGEF5Q92565 580 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 HSPH1Q92598 858 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 KLK6Q92876 244 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 MRFAP1L1Q96HT8 127 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 PPP1R16AQ96I34 528 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 CNTNAP3BQ96NU0 1288 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 TUBGCP5Q96RT8 1024 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 ZNF670Q9BS34 389 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 SLC17A9Q9BYT1 436 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 CNTNAP3Q9BZ76 1288 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 ZWILCHQ9H900 591 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 SALL4Q9UJQ4 1053 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 INTUQ9ULD6 942 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 HPCAL4Q9UM19 191 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 REXO2Q9Y3B8 237 aaKnown RBP11.38□□□□□ -0.59
CLCC1-201ENST00000302500 FARP1Q9Y4F1 1045 aaPredicted RBP11.38□□□□□ -0.59
CLCC1-201ENST00000302500 HS3ST3A1Q9Y663 406 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 U3KQA8 63 aa11.38□□□□□ -0.59
CLCC1-201ENST00000302500 RCCD1A6NED2 376 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 IGLON5A6NGN9 336 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 ARHGAP42A6NI28 874 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 H3BRJ5 948 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 MYO1FO00160 1098 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 RIOK3O14730 519 aaKnown RBP11.37□□□□□ -0.59
CLCC1-201ENST00000302500 SLC31A1O15431 190 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 FZD6O60353 706 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 DFNA5O60443 496 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 IGSF6O95976 241 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 TPM3P06753 285 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 IGFALSP35858 605 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 RECQLP46063 649 aaPredicted RBP11.37□□□□□ -0.59
CLCC1-201ENST00000302500 CCT8P50990 548 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 ZNF75DP51815 510 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 ATXN3P54252 364 aaPredicted RBP11.37□□□□□ -0.59
CLCC1-201ENST00000302500 CLDN2P57739 230 aa11.37□□□□□ -0.59
CLCC1-201ENST00000302500 RPS21P63220 83 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms