RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 RALGPS1Q5JS13 557 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 MROH9Q5TGP6 573 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 RNF219Q5W0B1 726 aaPredicted RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 C6orf89Q6UWU4 347 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 KYAT3Q6YP21 454 aaKnown RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 YTHDF3Q7Z739 585 aaKnown RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 STRA8Q7Z7C7 330 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 TRIM42Q8IWZ5 723 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 ANKS4BQ8N8V4 417 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 OR52K2Q8NGK3 314 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 RAB3IL1Q8TBN0 382 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 TMA16Q96EY4 203 aaKnown RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 KLF6Q99612 283 aaPredicted RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 PAIP2Q9BPZ3 127 aaKnown RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 FAM167BQ9BTA0 163 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 SPON2Q9BUD6 331 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 CINPQ9BW66 212 aaPredicted RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 ATXN3LQ9H3M9 355 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 ALG13Q9NP73 1137 aaKnown RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 SLC17A7Q9P2U7 560 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 DCDC2Q9UHG0 476 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 GRID1Q9ULK0 1009 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 ARHGAP26Q9UNA1 814 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 YBX2Q9Y2T7 364 aaKnown RBP12.13□□□□□ -0.47
TPM3-202ENST00000302206 PSAT1Q9Y617 370 aa12.13□□□□□ -0.47
TPM3-202ENST00000302206 MROH6A6NGR9 719 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 HIDE1A8MVS5 230 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 KLF11O14901 512 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 MUSKO15146 869 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 BIRC5O15392 142 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 SNX3O60493 162 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 GPR37L1O60883 481 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 GLRA3O75311 464 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 ZMPSTE24O75844 475 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 IL1BP01584 269 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 ALDOAP04075 364 aaKnown RBP12.12□□□□□ -0.47
TPM3-202ENST00000302206 MPOP05164 745 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 CKMP06732 381 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 GSTA1P08263 222 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 SERPINF2P08697 491 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 ATXN1LP0C7T5 689 aaKnown RBP12.12□□□□□ -0.47
TPM3-202ENST00000302206 PTPN2P17706 415 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 CR2P20023 1033 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 SERPINB8P50452 374 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 CDK18Q07002 472 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 NSUN2Q08J23 767 aaKnown RBP eCLIP12.12□□□□□ -0.47
TPM3-202ENST00000302206 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
TPM3-202ENST00000302206 IHHQ14623 411 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 POU6F1Q14863 301 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 CYTH1Q15438 398 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 PCSK7Q16549 785 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 HSP90AA5PQ58FG0 334 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 SIRPB2Q5JXA9 342 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 TSTD2Q5T7W7 516 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 PLPP4Q5VZY2 271 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 KIAA0408Q6ZU52 694 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 GALNT7Q86SF2 657 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 LCA5Q86VQ0 697 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 LMNTD2Q8IXW0 634 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 NDUFAF2Q8N183 169 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.12□□□□□ -0.47
TPM3-202ENST00000302206 MAB21L3Q8N8X9 362 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 DCAF4L2Q8NA75 395 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 CALML6Q8TD86 181 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 ZNF75CPQ92670 426 aaPredicted RBP12.12□□□□□ -0.47
TPM3-202ENST00000302206 ATP2A3Q93084 1043 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 IFT43Q96FT9 208 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 NUDCD1Q96RS6 583 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 MUC3BQ9H195 1237 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 RHOJQ9H4E5 214 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 FGFR1OP2Q9NVK5 253 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 DNMT3BQ9UBC3 853 aaKnown RBP12.12□□□□□ -0.47
TPM3-202ENST00000302206 DPP7Q9UHL4 492 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 SH3BP1Q9Y3L3 701 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 STARD13Q9Y3M8 1113 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 OR51B4Q9Y5P0 310 aa12.12□□□□□ -0.47
TPM3-202ENST00000302206 E2F8A0AVK6 867 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 H0Y626 953 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 TPP1O14773 563 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 CCL16O15467 120 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 INSIG1O15503 277 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 SLC7A4O43246 635 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 EDF1O60869 148 aaKnown RBP12.11□□□□□ -0.47
TPM3-202ENST00000302206 NDST3O95803 873 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 MYL4P12829 197 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 MYOGP15173 224 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 TCF3P15923 654 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 CHRNA4P43681 627 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 SERPINB4P48594 390 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 CSRP3P50461 194 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 ZXDBP98169 803 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 PDE1BQ01064 536 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 ACVR1Q04771 509 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 THOC5Q13769 683 aaKnown RBP12.11□□□□□ -0.47
TPM3-202ENST00000302206 ARHGAP15Q53QZ3 475 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 FYB2Q5VWT5 728 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 ESRP1Q6NXG1 681 aaKnown RBP12.11□□□□□ -0.47
TPM3-202ENST00000302206 ELMSAN1Q6PJG2 1045 aa12.11□□□□□ -0.47
TPM3-202ENST00000302206 METTL3Q86U44 580 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms