RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 PTPRHQ9HD43 1115 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 TMEM9Q9P0T7 183 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 RUVBL2Q9Y230 463 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 TMEM98Q9Y2Y6 226 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 RBMX2Q9Y388 322 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CTDP1Q9Y5B0 961 aaPredicted RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 GJA3Q9Y6H8 435 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 ZFC3H1O60293 1989 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 RNF103-CHMP3A0A140T963 221 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 NEMP2A6NFY4 417 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 HACD1B0YJ81 288 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 VWA5AO00534 786 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CPNE6O95741 557 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 NFKBIAP25963 317 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 GNL1P36915 607 aaPredicted RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CSE1LP55060 971 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 YBX1P67809 324 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 SQLEQ14534 574 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 OXA1LQ15070 435 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 ATP6AP1Q15904 470 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 TRIM16LQ309B1 348 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 ANO4Q32M45 955 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 MAP7D1Q3KQU3 841 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 PPP1R26Q5T8A7 1209 aaPredicted RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 JADE1Q6IE81 842 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 ABRAXAS1Q6UWZ7 409 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CMTR2Q8IYT2 770 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 SLC7A5P1Q8MH63 180 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 LRRC71Q8N4P6 559 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 SLC16A10Q8TF71 515 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 LPAR1Q92633 364 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 SNX27Q96L92 541 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 ADAMTS10Q9H324 1103 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 TMPRSS4Q9NRS4 437 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 SACM1LQ9NTJ5 587 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CROTQ9UKG9 612 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 TLK1Q9UKI8 766 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 B3GNT3Q9Y2A9 372 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CPQQ9Y646 472 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 LCTP09848 1927 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 DHRS12A0PJE2 317 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 TRPC5OSA6NMA1 111 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 NME4O00746 187 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 MT-CO1P00395 513 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 PGK1P00558 417 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 GJB1P08034 283 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 IREB2P48200 963 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CCT8P50990 548 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 LAMTOR4Q0VGL1 99 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 USP10Q14694 798 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 ATF7IP2Q5U623 682 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 TMEM110Q86TL2 294 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 RETREG3Q86VR2 466 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 ZC3HC1Q86WB0 502 aaKnown RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CADM3Q8N126 398 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CCNYQ8ND76 341 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 SHCBP1Q8NEM2 672 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 USP33Q8TEY7 942 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 STARD8Q92502 1023 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CSF3RQ99062 836 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 APOL2Q9BQE5 337 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CDT1Q9H211 546 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 PRDM12Q9H4Q4 367 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 RPAP3Q9H6T3 665 aaPredicted RBP10.98□□□□□ -0.65
ZNF558-201ENST00000301475 CHRAC1Q9NRG0 131 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 EGFL7Q9UHF1 273 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 SLC27A5Q9Y2P5 690 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 GIT1Q9Y2X7 761 aa10.98□□□□□ -0.65
ZNF558-201ENST00000301475 NRP2O60462 931 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 CLPXO76031 633 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 BCL10O95999 233 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 SNRPB2P08579 225 aaKnown RBP10.97□□□□□ -0.65
ZNF558-201ENST00000301475 OPRL1P41146 370 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 PRKAA2P54646 552 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 INCA1Q0VD86 236 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 PLCL1Q15111 1095 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 SOWAHAQ2M3V2 549 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 PKDCCQ504Y2 493 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 CYBRD1Q53TN4 286 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 FAM45BPQ6NSW5 357 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 SPPL2CQ8IUH8 684 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 SLC41A1Q8IVJ1 513 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 FAM45AQ8TCE6 357 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 CDHR1Q96JP9 859 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 GPR78Q96P69 363 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 ALPK1Q96QP1 1244 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 SEZ6LQ9BYH1 1024 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 GPRC5DQ9NZD1 345 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 DNMT3BQ9UBC3 853 aaKnown RBP10.97□□□□□ -0.65
ZNF558-201ENST00000301475 DAPK2Q9UIK4 370 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 LACTBL1A8MY62 500 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 UBDO15205 165 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 MAFO75444 373 aaPredicted RBP10.97□□□□□ -0.65
ZNF558-201ENST00000301475 PTPN9P43378 593 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 GLUD2P49448 558 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 IFRD2Q12894 506 aaPredicted RBP10.97□□□□□ -0.65
ZNF558-201ENST00000301475 ZBTB17Q13105 803 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 MAPRE2Q15555 327 aa10.97□□□□□ -0.65
ZNF558-201ENST00000301475 TMEM214Q6NUQ4 689 aaKnown RBP10.97□□□□□ -0.65
ZNF558-201ENST00000301475 PID1Q7Z2X4 250 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms