RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 CITED4Q96RK1 184 aa11.96□□□□□ -0.49
ERCC1-202ENST00000300853 SORT1Q99523 831 aa11.96□□□□□ -0.49
ERCC1-202ENST00000300853 WDR83Q9BRX9 315 aaKnown RBP11.96□□□□□ -0.49
ERCC1-202ENST00000300853 MTRRQ9UBK8 725 aa11.96□□□□□ -0.49
ERCC1-202ENST00000300853 FAM198AQ9UFP1 575 aa11.96□□□□□ -0.49
ERCC1-202ENST00000300853 LIMD1Q9UGP4 676 aa11.96□□□□□ -0.49
ERCC1-202ENST00000300853 PRELID1Q9Y255 219 aa11.96□□□□□ -0.49
ERCC1-202ENST00000300853 ERGIC3Q9Y282 383 aa11.96□□□□□ -0.49
ERCC1-202ENST00000300853 RNF11Q9Y3C5 154 aa11.96□□□□□ -0.49
ERCC1-202ENST00000300853 SUPT3HB4E1H0 165 aa11.96□□□□□ -0.5
ERCC1-202ENST00000300853 RSL1D1O76021 490 aaKnown RBP11.96□□□□□ -0.5
ERCC1-202ENST00000300853 GNAO1P09471 354 aa11.96□□□□□ -0.5
ERCC1-202ENST00000300853 TCEA1P23193 301 aaKnown RBP11.96□□□□□ -0.5
ERCC1-202ENST00000300853 CDH13P55290 713 aa11.96□□□□□ -0.5
ERCC1-202ENST00000300853 SLC6A3Q01959 620 aa11.96□□□□□ -0.5
ERCC1-202ENST00000300853 CA9Q16790 459 aa11.96□□□□□ -0.5
ERCC1-202ENST00000300853 ARMC4Q5T2S8 1044 aa11.96□□□□□ -0.5
ERCC1-202ENST00000300853 PSTKQ8IV42 348 aaKnown RBP11.96□□□□□ -0.5
ERCC1-202ENST00000300853 FSTL5Q8N475 847 aaPredicted RBP11.96□□□□□ -0.5
ERCC1-202ENST00000300853 PNPT1Q8TCS8 783 aaKnown RBP11.96□□□□□ -0.5
ERCC1-202ENST00000300853 ZNF778Q96MU6 729 aa11.96□□□□□ -0.5
ERCC1-202ENST00000300853 NAA50Q9GZZ1 169 aaKnown RBP11.96□□□□□ -0.5
ERCC1-202ENST00000300853 PXMP2Q9NR77 195 aa11.96□□□□□ -0.5
ERCC1-202ENST00000300853 OXSMQ9NWU1 459 aa11.96□□□□□ -0.5
ERCC1-202ENST00000300853 NFASCO94856 1347 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 CNTNAP4Q9C0A0 1308 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 HACD1B0YJ81 288 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 TNPO2O14787 897 aaKnown RBP11.95□□□□□ -0.5
ERCC1-202ENST00000300853 SLC22A2O15244 555 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 GABBR2O75899 941 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 IL18RAPO95256 599 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 SUPT20HL2P0C7V6 817 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 EMP3P54852 163 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 TNFAIP2Q03169 654 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 SUPT20HL1Q3ZLR7 823 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 ATP6AP1LQ52LC2 224 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 CUZD1Q86UP6 607 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 SLC7A14Q8TBB6 771 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 CRYGNQ8WXF5 182 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 STRA6Q9BX79 667 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 LHX5Q9H2C1 402 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 PLEKHA5Q9HAU0 1116 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 COMMD8Q9NX08 183 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 SFMBT1Q9UHJ3 866 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 SCAF8Q9UPN6 1271 aaKnown RBP11.95□□□□□ -0.5
ERCC1-202ENST00000300853 BTBD3Q9Y2F9 522 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 PTPRJQ12913 1337 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 SPATA31A6Q5VVP1 1343 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 LOC100506127A0A0U1RQW1 187 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 PRSS51A0A1B0GVH4 220 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 MAGEB16A2A368 324 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 NEMP2A6NFY4 417 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 A8MU76 341 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 AGRPO00253 132 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 MAFGO15525 162 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 GCATO75600 419 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 TOMM70O94826 608 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 TM4SF1P30408 202 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 TUFMP49411 452 aaKnown RBP11.95□□□□□ -0.5
ERCC1-202ENST00000300853 VAC14Q08AM6 782 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 SPP2Q13103 211 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 SPANXN2Q5MJ10 180 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 ARMCX2Q7L311 632 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 IGFN1Q86VF2 1251 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 ZNF597Q96LX8 424 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 VTA1Q9NP79 307 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 GDAP2Q9NXN4 497 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 ARHGAP28Q9P2N2 729 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 ZNF541Q9H0D2 1346 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 FAM20BO75063 409 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 MTHFD1P11586 935 aaKnown RBP11.95□□□□□ -0.5
ERCC1-202ENST00000300853 PABPC1P11940 636 aaKnown RBP11.95□□□□□ -0.5
ERCC1-202ENST00000300853 PHC1P78364 1004 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 CDH17Q12864 832 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 DMC1Q14565 340 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 ZNF460Q14592 562 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 RC3H1Q5TC82 1133 aaKnown RBP11.95□□□□□ -0.5
ERCC1-202ENST00000300853 CLEC6AQ6EIG7 209 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 PACRGLQ8N7B6 248 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 FAM167AQ96KS9 214 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 PRMT6Q96LA8 375 aaPredicted RBP11.95□□□□□ -0.5
ERCC1-202ENST00000300853 ZNF347Q96SE7 839 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 ANKRD60Q9BZ19 345 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 ROGDIQ9GZN7 287 aa11.95□□□□□ -0.5
ERCC1-202ENST00000300853 RPAP3Q9H6T3 665 aaPredicted RBP11.95□□□□□ -0.5
ERCC1-202ENST00000300853 CNOT11Q9UKZ1 510 aaKnown RBP11.95□□□□□ -0.5
ERCC1-202ENST00000300853 H0Y858 1186 aa11.94□□□□□ -0.5
ERCC1-202ENST00000300853 PLOD2O00469 737 aa11.94□□□□□ -0.5
ERCC1-202ENST00000300853 AURKAO14965 403 aa11.94□□□□□ -0.5
ERCC1-202ENST00000300853 SYNCRIPO60506 623 aaKnown RBP11.94□□□□□ -0.5
ERCC1-202ENST00000300853 THRBP10828 461 aa11.94□□□□□ -0.5
ERCC1-202ENST00000300853 RAB10P61026 200 aa11.94□□□□□ -0.5
ERCC1-202ENST00000300853 MPP1Q00013 466 aa11.94□□□□□ -0.5
ERCC1-202ENST00000300853 MXD4Q14582 209 aaPredicted RBP11.94□□□□□ -0.5
ERCC1-202ENST00000300853 CCDC85BQ15834 202 aaPredicted RBP11.94□□□□□ -0.5
ERCC1-202ENST00000300853 PPP4R4Q6NUP7 873 aa11.94□□□□□ -0.5
ERCC1-202ENST00000300853 MPZL3Q6UWV2 235 aa11.94□□□□□ -0.5
ERCC1-202ENST00000300853 C15orf52Q6ZUT6 534 aaKnown RBP11.94□□□□□ -0.5
ERCC1-202ENST00000300853 LINC00523Q86TU6 105 aa11.94□□□□□ -0.5
ERCC1-202ENST00000300853 BEST2Q8NFU1 509 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms