RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 TUBA4AP68366 448 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 PLIN5Q00G26 463 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 TARBP2Q15633 366 aaKnown RBP14.79□□□□□ -0.04
COL6A2-201ENST00000300527 NBPF12Q5TAG4 269 aaPredicted RBP14.79□□□□□ -0.04
COL6A2-201ENST00000300527 CYS1Q717R9 158 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 CTU1Q7Z7A3 348 aaKnown RBP14.79□□□□□ -0.04
COL6A2-201ENST00000300527 CENPLQ8N0S6 344 aaPredicted RBP14.79□□□□□ -0.04
COL6A2-201ENST00000300527 HEPHQ9BQS7 1158 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 CDHR5Q9HBB8 845 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 VPS28Q9UK41 221 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 AHDC1Q5TGY3 1603 aaPredicted RBP14.79□□□□□ -0.04
COL6A2-201ENST00000300527 TMEM247A6NEH6 219 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 SLCO1B7G3V0H7 640 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 FAM72CH0Y354 149 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 PGK1P00558 417 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 C8BP07358 591 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 FASP25445 335 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 OXTRP30559 389 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 ADIGQ0VDE8 80 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 LAMC2Q13753 1193 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 FBXO48Q5FWF7 155 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 FAM72AQ5TYM5 149 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 FAM72DQ6L9T8 149 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 CLEC14AQ86T13 490 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 ZC3HC1Q86WB0 502 aaKnown RBP14.79□□□□□ -0.04
COL6A2-201ENST00000300527 FAM72BQ86X60 149 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 DDIASQ8IXT1 998 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 DHRSXQ8N5I4 330 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 TNIP2Q8NFZ5 429 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 DNAJB14Q8TBM8 379 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 HEXDCQ8WVB3 486 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 DPYSL4O14531 572 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 APOA4P06727 396 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 KCNA5P22460 613 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 PSMA4P25789 261 aaKnown RBP14.79□□□□□ -0.04
COL6A2-201ENST00000300527 ELK4P28324 431 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 PIGFQ07326 219 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 MAPRE2Q15555 327 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 C6orf183Q5T699 404 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 HDAC11Q96DB2 347 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 CCDC90BQ9GZT6 254 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 KLHL25Q9H0H3 589 aa14.79□□□□□ -0.04
COL6A2-201ENST00000300527 MRPL40Q9NQ50 206 aaKnown RBP14.79□□□□□ -0.04
COL6A2-201ENST00000300527 A8MU76 341 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 SNAP29O95721 258 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 ERCC2P18074 760 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 BACE1P56817 501 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 TAS2R39P59534 338 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 LSM3P62310 102 aaKnown RBP14.78□□□□□ -0.04
COL6A2-201ENST00000300527 GHRHRQ02643 423 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 INPP5AQ14642 412 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 HERC3Q15034 1050 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 C6orf10Q5SRN2 563 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 MAMDC4Q6UXC1 1216 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 SLC7A5P1Q8MH63 180 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 SLC7A14Q8TBB6 771 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 SPPL2BQ8TCT7 592 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 SLC2A14Q8TDB8 520 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 PKD2L2Q9NZM6 624 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 TRIP11Q15643 1979 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 SLC4A1P02730 911 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 CCNA2P20248 432 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 LRP8Q14114 963 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 ERMP1Q7Z2K6 904 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 CUZD1Q86UP6 607 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 AFAP1L2Q8N4X5 818 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 HMGCLL1Q8TB92 370 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 STYXQ8WUJ0 223 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 TAMM41Q96BW9 452 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 BEGAINQ9BUH8 593 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 CNOT11Q9UKZ1 510 aaKnown RBP14.78□□□□□ -0.04
COL6A2-201ENST00000300527 HTR3EA5X5Y0 456 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 HACD1B0YJ81 288 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 AURKAO14965 403 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 AP2A1O95782 977 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 MT-CYBP00156 380 aaPredicted RBP14.78□□□□□ -0.04
COL6A2-201ENST00000300527 GSTT2P0CG29 244 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 GSTT2BP0CG30 244 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 PCNAP12004 261 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 LMO2P25791 158 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 GRM5P41594 1212 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 NDUFV1P49821 464 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 TPI1P60174 286 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 ZNF470Q6ECI4 717 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 ANKRD26P1Q6NSI1 321 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 PPP4R4Q6NUP7 873 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 ESRP1Q6NXG1 681 aaKnown RBP14.78□□□□□ -0.04
COL6A2-201ENST00000300527 PIWIL3Q7Z3Z3 882 aaKnown RBP14.78□□□□□ -0.04
COL6A2-201ENST00000300527 EPHX4Q8IUS5 362 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 ANKRD52Q8NB46 1076 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 SLC35F5Q8WV83 523 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 HPS1Q92902 700 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 IL22Q9GZX6 179 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 OSBPL2Q9H1P3 480 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 SLC2A6Q9UGQ3 507 aa14.78□□□□□ -0.04
COL6A2-201ENST00000300527 CLDN5O00501 218 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 ANGPT2O15123 496 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 PMPCBO75439 489 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 PGK2P07205 417 aa14.77□□□□□ -0.04
COL6A2-201ENST00000300527 MATN1P21941 496 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms