RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ZNF197O14709 1029 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 RFPL1O75677 317 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 CA4P22748 312 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 GP5P40197 560 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 WDR4P57081 412 aaKnown RBP15.7■□□□□ 0.1
LSM6-201ENST00000296581 CDK18Q07002 472 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 DNAJC3Q13217 504 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 LRRC14Q15048 493 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 SIRPB2Q5JXA9 342 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 TEDDM1Q5T9Z0 273 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 ZNF697Q5TEC3 545 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 PDPK2PQ6A1A2 396 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 RBM23Q86U06 439 aaKnown RBP15.7■□□□□ 0.1
LSM6-201ENST00000296581 FIBINQ8TAL6 211 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 CKAP2Q8WWK9 683 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 KLF6Q99612 283 aaPredicted RBP15.7■□□□□ 0.1
LSM6-201ENST00000296581 PBX4Q9BYU1 374 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 C20orf96Q9NUD7 363 aaPredicted RBP15.7■□□□□ 0.1
LSM6-201ENST00000296581 VPS51Q9UID3 782 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 CHD7Q9P2D1 2997 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 HEATR9A2RTY3 570 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 INSIG1O15503 277 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 ZWINTO95229 277 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 ASMTLO95671 621 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 HLA-DPA1P20036 260 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 RPA3P35244 121 aaPredicted RBP15.7■□□□□ 0.1
LSM6-201ENST00000296581 CCNFP41002 786 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 BMPR2Q13873 1038 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 NAA25Q14CX7 972 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 RBBP5Q15291 538 aaKnown RBP15.7■□□□□ 0.1
LSM6-201ENST00000296581 DUSP6Q16828 381 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 APOPT1Q96IL0 206 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 ZNF317Q96PQ6 595 aaPredicted RBP15.7■□□□□ 0.1
LSM6-201ENST00000296581 NUDCD1Q96RS6 583 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 TRIB3Q96RU7 358 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 CERS4Q9HA82 394 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 NOD2Q9HC29 1040 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 CHD9Q3L8U1 2897 aa15.7■□□□□ 0.1
LSM6-201ENST00000296581 GOLGA8RI6L899 631 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 TMCC1O94876 653 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 SNUPNO95149 360 aaKnown RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 PRAMEF12O95522 483 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 FAM107AO95990 144 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 FGF1P05230 155 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 PYGBP11216 843 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 ARCN1P48444 511 aaKnown RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 USP4Q13107 963 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 ZNF77Q15935 545 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 HSP90AA5PQ58FG0 334 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 GRTP1Q5TC63 336 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 TPGS1Q6ZTW0 290 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 KIRREL3Q8IZU9 778 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 DYDC1Q8WWB3 177 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 BHMTQ93088 406 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 IFT43Q96FT9 208 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 NSMCE3Q96MG7 304 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 TLE6Q9H808 572 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 MLXIPLQ9NP71 852 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 MKS1Q9NXB0 559 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 CLEC4EQ9ULY5 219 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 TM9SF1O15321 606 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 PAPSS2O95340 614 aaPredicted RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 CYBBP04839 570 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 EZRP15311 586 aaKnown RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 NEK3P51956 506 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 PLK1P53350 603 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 MROH9Q5TGP6 573 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 KIAA0930Q6ICG6 404 aaPredicted RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 ESRP1Q6NXG1 681 aaKnown RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 LINGO4Q6UY18 593 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 YTHDF3Q7Z739 585 aaKnown RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 APCDD1Q8J025 514 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 CHMP6Q96FZ7 201 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 LMLNQ96KR4 655 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 CCT8L2Q96SF2 557 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 AGAP2Q99490 1192 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 MCMBPQ9BTE3 642 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 C2orf49Q9BVC5 232 aaPredicted RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 NKX2-4Q9H2Z4 354 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 KIAA1522Q9P206 1035 aaPredicted RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 LHX3Q9UBR4 397 aa15.69■□□□□ 0.1
LSM6-201ENST00000296581 NUP210Q8TEM1 1887 aaPredicted RBP15.69■□□□□ 0.1
LSM6-201ENST00000296581 CEBPBP17676 345 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 ARNTP27540 789 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 SCNN1BP51168 640 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 RPS6KA3P51812 740 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 NSUN2Q08J23 767 aaKnown RBP eCLIP15.68■□□□□ 0.1
LSM6-201ENST00000296581 LMAN2Q12907 356 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 SNCBQ16143 134 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 CNTN4Q8IWV2 1026 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 TCP10LQ8TDR4 215 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 ACDQ96AP0 544 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 ZSWIM3Q96MP5 696 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 RBBP8Q99708 897 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 SCUBE2Q9NQ36 999 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 NSMCE4AQ9NXX6 385 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 PLK2Q9NYY3 685 aa15.68■□□□□ 0.1
LSM6-201ENST00000296581 TXNDC16Q9P2K2 825 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms