RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 TRAFD1O14545 582 aaPredicted RBP27.18■■□□□ 1.94
SSU72-201ENST00000291386 MTSS1O43312 755 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 SOCS5O75159 536 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 GJB3O75712 270 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 HLA-DQB2P05538 268 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 ITPKAP23677 461 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 MAXP61244 160 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 CREB5Q02930 508 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 BCL2L1Q07817 233 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 ZBTB17Q13105 803 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 BRAT1Q6PJG6 821 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 TRIM69Q86WT6 500 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 SYT12Q8IV01 421 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 ACTL9Q8TC94 416 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 BIRC7Q96CA5 298 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 HAUS1Q96CS2 278 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 QKIQ96PU8 341 aaKnown RBP eCLIP27.18■■□□□ 1.94
SSU72-201ENST00000291386 NOD2Q9HC29 1040 aa27.18■■□□□ 1.94
SSU72-201ENST00000291386 RALGAPA1Q6GYQ0 2036 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 TBC1D3DA0A087WVF3 549 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 TBC1D3IA0A087WXS9 549 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 TBC1D3EA0A087X179 549 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 TBC1D3KA0A087X1G2 549 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 GOLGA6L9A6NEM1 432 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 TBC1D3FA6NER0 549 aaPredicted RBP27.17■■□□□ 1.94
SSU72-201ENST00000291386 MEI4A8MW99 385 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 TBC1D3LB9A6J9 549 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 HTRA2O43464 458 aaPredicted RBP27.17■■□□□ 1.94
SSU72-201ENST00000291386 JCHAINP01591 159 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 IGHV4-34P06331 123 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 TBC1D3HP0C7X1 549 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 MPLP40238 635 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 OTUD4Q01804 1114 aaKnown RBP27.17■■□□□ 1.94
SSU72-201ENST00000291386 SEL1L2Q5TEA6 688 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 CCDC181Q5TID7 509 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 TBC1D3GQ6DHY5 549 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 TBC1D3CQ6IPX1 549 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 ZC3H18Q86VM9 953 aaKnown RBP27.17■■□□□ 1.94
SSU72-201ENST00000291386 TBC1D3Q8IZP1 549 aaPredicted RBP27.17■■□□□ 1.94
SSU72-201ENST00000291386 CNTD1Q8N815 330 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 TTC13Q8NBP0 860 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 FADS3Q9Y5Q0 445 aa27.17■■□□□ 1.94
SSU72-201ENST00000291386 GON4LQ3T8J9 2241 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 A0A1W2PQ67 120 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 FAM47DPA6NHR8 397 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 LATO43561 262 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 NEBLO76041 1014 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 TIMP2P16035 220 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 ABL2P42684 1182 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 TEX44Q53QW1 395 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 SLC45A4Q5BKX6 768 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 ZSCAN30Q86W11 494 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 ARRDC2Q8TBH0 407 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 SEMA3CQ99985 751 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 VPS45Q9NRW7 570 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 TMEM74BQ9NUR3 256 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 TRMT1Q9NXH9 659 aaKnown RBP27.16■■□□□ 1.94
SSU72-201ENST00000291386 PYCARDQ9ULZ3 195 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 JRKLQ9Y4A0 524 aa27.16■■□□□ 1.94
SSU72-201ENST00000291386 TTC24A2A3L6 582 aaPredicted RBP27.15■■□□□ 1.94
SSU72-201ENST00000291386 AREL1O15033 823 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 FSBPO95073 299 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 TGM1P22735 817 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 ITKQ08881 620 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 UGP2Q16851 508 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 RABEPKQ7Z6M1 372 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 TTC7BQ86TV6 843 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 GPR161Q8N6U8 529 aaKnown RBP27.15■■□□□ 1.94
SSU72-201ENST00000291386 C1orf216Q8TAB5 229 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 PIGKQ92643 395 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 VAT1Q99536 393 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 ORAI3Q9BRQ5 295 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 SUSD2Q9UGT4 822 aa27.15■■□□□ 1.94
SSU72-201ENST00000291386 RIF1Q5UIP0 2472 aaKnown RBP27.14■■□□□ 1.94
SSU72-201ENST00000291386 TSPAN6O43657 245 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 ZNF189O75820 626 aaPredicted RBP27.14■■□□□ 1.94
SSU72-201ENST00000291386 ZNF806P0C7X5 589 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 PTPN3P26045 913 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 CD27P26842 260 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 NUDT1P36639 197 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 PPP2CBP62714 309 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 PPP2CAP67775 309 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 B4GALNT4Q76KP1 1039 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 ZSWIM9Q86XI8 627 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 RGL4Q8IZJ4 473 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 DCLK2Q8N568 766 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 CEP76Q8TAP6 659 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 HTR3CQ8WXA8 447 aa27.14■■□□□ 1.94
SSU72-201ENST00000291386 FAM186AA6NE01 2351 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 A0A1W2PPC4 97 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 UPK3BL1B0FP48 263 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 UPK3BL2E5RIL1 263 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 KCNK3O14649 394 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 SPINT1O43278 529 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 RNGTTO60942 597 aaKnown RBP27.13■■□□□ 1.93
SSU72-201ENST00000291386 POLR2LP62875 67 aaKnown RBP27.13■■□□□ 1.93
SSU72-201ENST00000291386 DSC2Q02487 901 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 NIPAL4Q0D2K0 466 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 WASHC5Q12768 1159 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 CSRP2Q16527 193 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms