RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 TFDP2Q14188 446 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 CYTH1Q15438 398 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 DLG2Q15700 870 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 SERPINA13PQ6UXR4 307 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 SYT13Q7L8C5 426 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 ADAT2Q7Z6V5 191 aaKnown RBP13.53□□□□□ -0.24
PSMB4-201ENST00000290541 ATP11CQ8NB49 1132 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 FRS2Q8WU20 508 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 PTPRN2Q92932 1015 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 WBP1Q96G27 269 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 OLFM3Q96PB7 478 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 LGMNQ99538 433 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 TPSD1Q9BZJ3 242 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 SLC6A17Q9H1V8 727 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 TNKS2Q9H2K2 1166 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 C10orf88Q9H8K7 445 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 DNAAF2Q9NVR5 837 aaKnown RBP13.53□□□□□ -0.24
PSMB4-201ENST00000290541 IL17BQ9UHF5 180 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 MMP17Q9ULZ9 603 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 R3HDM2Q9Y2K5 976 aaKnown RBP13.53□□□□□ -0.24
PSMB4-201ENST00000290541 BSNQ9UPA5 3926 aa13.53□□□□□ -0.24
PSMB4-201ENST00000290541 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
PSMB4-201ENST00000290541 UTP20O75691 2785 aaKnown RBP13.53□□□□□ -0.24
PSMB4-201ENST00000290541 CKAP5Q14008 2032 aa13.52□□□□□ -0.24
PSMB4-201ENST00000290541 RNF103O00237 685 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 TLX3O43711 291 aaPredicted RBP13.52□□□□□ -0.25
PSMB4-201ENST00000290541 SIN3BO75182 1162 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 EPHX1P07099 455 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 C6P13671 934 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 HOXB2P14652 356 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 TGM2P21980 687 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 GARSP41250 739 aaKnown RBP13.52□□□□□ -0.25
PSMB4-201ENST00000290541 PTGER3P43115 390 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 SERPINH1P50454 418 aaKnown RBP13.52□□□□□ -0.25
PSMB4-201ENST00000290541 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
PSMB4-201ENST00000290541 DGKEP52429 567 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 RIPPLY3P57055 190 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 ST8SIA6P61647 398 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 IL10RBQ08334 325 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 KLF1Q13351 362 aaPredicted RBP13.52□□□□□ -0.25
PSMB4-201ENST00000290541 HNRNPA1L2Q32P51 320 aaKnown RBP13.52□□□□□ -0.25
PSMB4-201ENST00000290541 ACCSLQ4AC99 568 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 USP39Q53GS9 565 aaKnown RBP13.52□□□□□ -0.25
PSMB4-201ENST00000290541 C9orf64Q5T6V5 341 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 SEL1L2Q5TEA6 688 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 RETSATQ6NUM9 610 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 SLC13A5Q86YT5 568 aaPredicted RBP13.52□□□□□ -0.25
PSMB4-201ENST00000290541 NAXDQ8IW45 347 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 ATPAF2Q8N5M1 289 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 COG1Q8WTW3 980 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 UBE2Q2Q8WVN8 375 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 ZNF419Q96HQ0 510 aaPredicted RBP13.52□□□□□ -0.25
PSMB4-201ENST00000290541 MS4A14Q96JA4 679 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 CARD9Q9H257 536 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 PRDM16Q9HAZ2 1276 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 SP110Q9HB58 689 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 CAPN10Q9HC96 672 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 PRSS16Q9NQE7 514 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 TOR4AQ9NXH8 423 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 SMARCAL1Q9NZC9 954 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 UBA2Q9UBT2 640 aaPredicted RBP13.52□□□□□ -0.25
PSMB4-201ENST00000290541 HPCAL4Q9UM19 191 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 EFR3BQ9Y2G0 817 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 PCDHB9Q9Y5E1 797 aa13.52□□□□□ -0.25
PSMB4-201ENST00000290541 MUSKO15146 869 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 ZNF185O15231 689 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 BNIP3LO60238 219 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 CEP104O60308 925 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 CBFA2T3O75081 653 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 TMCC1O94876 653 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 CETN2P41208 172 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 OTUD4Q01804 1114 aaKnown RBP13.51□□□□□ -0.25
PSMB4-201ENST00000290541 SLC20A2Q08357 652 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 SLC10A7Q0GE19 358 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 SIX1Q15475 284 aaPredicted RBP13.51□□□□□ -0.25
PSMB4-201ENST00000290541 CRY1Q16526 586 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 HSF5Q4G112 596 aaPredicted RBP13.51□□□□□ -0.25
PSMB4-201ENST00000290541 TAF1BQ53T94 588 aaPredicted RBP13.51□□□□□ -0.25
PSMB4-201ENST00000290541 EOGTQ5NDL2 527 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 ATXN7L2Q5T6C5 722 aaPredicted RBP13.51□□□□□ -0.25
PSMB4-201ENST00000290541 SDE2Q6IQ49 451 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 C22orf39Q6P5X5 142 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 NYAP1Q6ZVC0 841 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 Q6ZVU0 165 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 TRMT11Q7Z4G4 463 aaKnown RBP13.51□□□□□ -0.25
PSMB4-201ENST00000290541 RASSF3Q86WH2 238 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 STK40Q8N2I9 435 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 KDM1BQ8NB78 822 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 CHST14Q8NCH0 376 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 CCNYQ8ND76 341 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 CCDC26Q8TAB7 109 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 ACTL9Q8TC94 416 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 VOPP1Q96AW1 172 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 TSGA13Q96PP4 275 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 OSBPL9Q96SU4 736 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 LHX3Q9UBR4 397 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 PILRBQ9UKJ0 227 aa13.51□□□□□ -0.25
PSMB4-201ENST00000290541 USP9YO00507 2555 aaPredicted RBP13.51□□□□□ -0.25
PSMB4-201ENST00000290541 TTC24A2A3L6 582 aaPredicted RBP13.5□□□□□ -0.25
PSMB4-201ENST00000290541 ZSCAN5CA6NGD5 496 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms