RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 FBXO44Q9H4M3 255 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 ELOVL6Q9H5J4 265 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 PEX16Q9Y5Y5 336 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 TRUB2O95900 331 aaKnown RBP17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 JCHAINP01591 159 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 CDH8P55286 799 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 OXCT1P55809 520 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 CNTN2Q02246 1040 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 TWF1Q12792 350 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 SPATA19Q7Z5L4 167 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 RNF157Q96PX1 679 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 EPB41L4BQ9H329 900 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 ERVK-5Q9HDB9 667 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 PRKAG3Q9UGI9 489 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 TRIM17Q9Y577 477 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 MED1Q15648 1581 aaPredicted RBP17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 LACTBL1A8MY62 500 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 ALDH2P05091 517 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 IRF1P10914 325 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 ACLYP53396 1101 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 PHKG1Q16816 387 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 ANKRD52Q8NB46 1076 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 WDR36Q8NI36 951 aaKnown RBP17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 CLPBQ9H078 707 aa17.66■□□□□ 0.42
PCDHA13-201ENST00000289272 BTN3A3O00478 584 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 LYPLA2O95372 231 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 ASLP04424 464 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 PSEN2P49810 448 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 PGS1Q32NB8 556 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 CENPNQ96H22 339 aaPredicted RBP17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 PPP3R2Q96LZ3 170 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 RPRD1AQ96P16 312 aaPredicted RBP17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 GRHL1Q9NZI5 618 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 TRPV2Q9Y5S1 764 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 SLC15A5A6NIM6 579 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 TULP3O75386 442 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 ITGALP20701 1170 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 PPP3CCP48454 512 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 C5orf22Q49AR2 442 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 LRRC49Q8IUZ0 686 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 PCDHB12Q9Y5F1 795 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 RENBPP51606 427 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 TNFAIP8L3Q5GJ75 292 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 NIPAL1Q6NVV3 410 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 FAM117BQ6P1L5 589 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 NKAPQ8N5F7 415 aaKnown RBP17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 STAG3L4Q8TBR4 150 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 RBM4BQ9BQ04 359 aaKnown RBP17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 RBM4Q9BWF3 364 aaKnown RBP17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 EBF3Q9H4W6 596 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 ZDHHC18Q9NUE0 388 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 TMEM59LQ9UK28 342 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 MGAT4DA6NG13 374 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 HAT1O14929 419 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 NAGLUP54802 743 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 TUBA3CQ13748 450 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 TSC22D1Q15714 1073 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 ACSBG2Q5FVE4 666 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 AMIGO2Q86SJ2 522 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 DSELQ8IZU8 1212 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 IL31RAQ8NI17 732 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 TP53INP1Q96A56 240 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 ROGDIQ9GZN7 287 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 SPASTQ9UBP0 616 aa17.65■□□□□ 0.42
PCDHA13-201ENST00000289272 KLF11O14901 512 aa17.64■□□□□ 0.42
PCDHA13-201ENST00000289272 NRP2O60462 931 aa17.64■□□□□ 0.42
PCDHA13-201ENST00000289272 GSSP48637 474 aa17.64■□□□□ 0.42
PCDHA13-201ENST00000289272 RAB10P61026 200 aa17.64■□□□□ 0.42
PCDHA13-201ENST00000289272 NOMO3P69849 1222 aa17.64■□□□□ 0.42
PCDHA13-201ENST00000289272 ZBED5Q49AG3 693 aa17.64■□□□□ 0.42
PCDHA13-201ENST00000289272 HIPK1Q86Z02 1210 aa17.64■□□□□ 0.42
PCDHA13-201ENST00000289272 CCDC36Q8IYA8 594 aa17.64■□□□□ 0.42
PCDHA13-201ENST00000289272 CDHR5Q9HBB8 845 aa17.64■□□□□ 0.42
PCDHA13-201ENST00000289272 STXBP5LQ9Y2K9 1186 aa17.64■□□□□ 0.42
PCDHA13-201ENST00000289272 TRIM43BA6NCK2 446 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 ZACNQ401N2 412 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 TYW3Q6IPR3 259 aaKnown RBP17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 ADGRE3Q9BY15 652 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 SNTG2Q9NY99 539 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 IFT80Q9P2H3 777 aaPredicted RBP17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 ZBTB11O95625 1053 aaPredicted RBP17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 S100A3P33764 101 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 ZNF470Q6ECI4 717 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 CLYBLQ8N0X4 340 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 BLOC1S5Q8TDH9 187 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 FCGR1BQ92637 280 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 RRAGCQ9HB90 399 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 ARHGAP28Q9P2N2 729 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 UBA1P22314 1058 aaKnown RBP17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 DGKKQ5KSL6 1271 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 GALNT18Q6P9A2 607 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 STK40Q8N2I9 435 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 SVOPLQ8N434 492 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 PHF21BQ96EK2 531 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 TRIM39Q9HCM9 518 aa17.64■□□□□ 0.41
PCDHA13-201ENST00000289272 CALCAP01258 141 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 PPP2R1BP30154 601 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 TKTL1P51854 596 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 SMIM11AP58511 58 aa17.63■□□□□ 0.41
PCDHA13-201ENST00000289272 MAP1SQ66K74 1059 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms