RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 MIB1Q86YT6 1006 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 ARNTL2Q8WYA1 636 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 ISL2Q96A47 359 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 ZFRQ96KR1 1074 aaKnown RBP18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 C8orf48Q96LL4 319 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 OSBPL2Q9H1P3 480 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 SYBUQ9NX95 663 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 SCML2Q9UQR0 700 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 HS3ST4Q9Y661 456 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 NFKB1P19838 968 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 MAGEA12P43365 314 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 PEX6Q13608 980 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 TRIM60Q495X7 471 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 GRTP1Q5TC63 336 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 ZFP1Q6P2D0 407 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 C16orf89Q6UX73 402 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 MON1AQ86VX9 555 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 GIPC2Q8TF65 315 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 HDAC11Q96DB2 347 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 CPNE1Q99829 537 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 FERMT1Q9BQL6 677 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 CLIC5Q9NZA1 410 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 IGSF9Q9P2J2 1179 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 BCAP29Q9UHQ4 241 aa18.51■□□□□ 0.55
PDLIM3-201ENST00000284767 OR6B1O95007 311 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 HSPA4LO95757 839 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 CLPTM1O96005 669 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 HMBSP08397 361 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 THRAP10827 490 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 TLE2Q04725 743 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 PPM1JQ5JR12 505 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 PIK3R6Q5UE93 754 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 BEND5Q7L4P6 421 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 OTOP3Q7RTS5 596 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 ARHGAP12Q8IWW6 846 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 EFCAB3Q8N7B9 438 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 ZSCAN18Q8TBC5 510 aaPredicted RBP18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 DIS3LQ8TF46 1054 aaKnown RBP18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 SREK1Q8WXA9 508 aaKnown RBP18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 NMD3Q96D46 503 aaKnown RBP18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 MPP4Q96JB8 637 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 MLPHQ9BV36 600 aaPredicted RBP18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 OCEL1Q9H607 264 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 BPTFQ12830 3046 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 DNAJA2O60884 412 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 H2AFYO75367 372 aaKnown RBP18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 ZMPSTE24O75844 475 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 PGM3O95394 542 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 GLDCP23378 1020 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 PMLP29590 882 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 CNGA3Q16281 694 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 TBC1D25Q3MII6 688 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 TMEM259Q4ZIN3 620 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 B3GNT6Q6ZMB0 384 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 CNTD1Q8N815 330 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 FBXO32Q969P5 355 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 MRPS26Q9BYN8 205 aaKnown RBP18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 SNX15Q9NRS6 342 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 VPS28Q9UK41 221 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 OGDHLQ9ULD0 1010 aa18.5■□□□□ 0.55
PDLIM3-201ENST00000284767 KCNU1A8MYU2 1149 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 E9PBE3 544 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 KLHL41O60662 606 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 SPATA31D3P0C874 917 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 MNX1P50219 401 aaPredicted RBP18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 TAF10Q12962 218 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 BRMS1LQ5PSV4 323 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 SH2D4BQ5SQS7 431 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 MANEALQ5VSG8 457 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 SPATA31D4Q6ZUB0 917 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 AHI1Q8N157 1196 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 ZNF781Q8N8C0 355 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 DPF3Q92784 378 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 CNDP1Q96KN2 507 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 LRGUKQ96M69 825 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 TRIM62Q9BVG3 475 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 SLC39A8Q9C0K1 460 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 VANGL2Q9ULK5 521 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 E9PAM4 449 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 VILLO15195 856 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 TMCC1O94876 653 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 TFAP2AP05549 437 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 SERPINB8P50452 374 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 USP4Q13107 963 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 PSMD5Q16401 504 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 SLC9B1Q4ZJI4 515 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 FAM117BQ6P1L5 589 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 SLC39A5Q6ZMH5 540 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 ALDH16A1Q8IZ83 802 aa18.49■□□□□ 0.55
PDLIM3-201ENST00000284767 FNDC1Q4ZHG4 1894 aaPredicted RBP18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 SLC22A2O15244 555 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 NCAM2O15394 837 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 TNFAIP8O95379 198 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 POLBP06746 335 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 YWHAQP27348 245 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 HSP90AA5PQ58FG0 334 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 SPANXN3Q5MJ09 141 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 RBM44Q6ZP01 1051 aaKnown RBP18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 TFAP2DQ7Z6R9 452 aa18.48■□□□□ 0.55
PDLIM3-201ENST00000284767 ADCY4Q8NFM4 1077 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms