RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 PSMD12O00232 456 aaPredicted RBP11.47□□□□□ -0.57
SCLT1-201ENST00000281142 XPOTO43592 962 aaKnown RBP11.47□□□□□ -0.57
SCLT1-201ENST00000281142 MT-CO1P00395 513 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 MYL3P08590 195 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 LCP1P13796 627 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 AMHR2Q16671 573 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 OGFOD2Q6N063 350 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 CROCCP3Q8IVE0 287 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 KLHDC9Q8NEP7 349 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 HNRNPABQ99729 332 aaKnown RBP11.47□□□□□ -0.57
SCLT1-201ENST00000281142 MRPL45Q9BRJ2 306 aaKnown RBP11.47□□□□□ -0.57
SCLT1-201ENST00000281142 PLGRKTQ9HBL7 147 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 NRBP2Q9NSY0 501 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 SELENONQ9NZV5 590 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 CNOT6Q9ULM6 557 aaKnown RBP11.47□□□□□ -0.57
SCLT1-201ENST00000281142 USP3Q9Y6I4 520 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 SCN1AP35498 2009 aa11.47□□□□□ -0.57
SCLT1-201ENST00000281142 ZBTB42B2RXF5 422 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 PPEF2O14830 753 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 CBFA2T3O75081 653 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 PURAQ00577 322 aaKnown RBP11.46□□□□□ -0.57
SCLT1-201ENST00000281142 TGFBIQ15582 683 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 PPP1R3AQ16821 1122 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 CCSAPQ6IQ19 270 aaPredicted RBP11.46□□□□□ -0.57
SCLT1-201ENST00000281142 C4orf22Q6V702 233 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 CHSY3Q70JA7 882 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 PID1Q7Z2X4 250 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 ZNF786Q8N393 782 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 PPWD1Q96BP3 646 aaKnown RBP11.46□□□□□ -0.57
SCLT1-201ENST00000281142 VPS39Q96JC1 886 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 PPP1R10Q96QC0 940 aaKnown RBP11.46□□□□□ -0.57
SCLT1-201ENST00000281142 PAIP1Q9H074 479 aaKnown RBP11.46□□□□□ -0.57
SCLT1-201ENST00000281142 RNF208Q9H0X6 261 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 PRDM12Q9H4Q4 367 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 TNFRSF12AQ9NP84 129 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 CHRAC1Q9NRG0 131 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 ERAP1Q9NZ08 941 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 NEMP2A6NFY4 417 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 GSTT2P0CG29 244 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 GSTT2BP0CG30 244 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 HNRNPLP14866 589 aaKnown RBP eCLIP11.46□□□□□ -0.57
SCLT1-201ENST00000281142 TRIM25Q14258 630 aaKnown RBP11.46□□□□□ -0.57
SCLT1-201ENST00000281142 LIPMQ5VYY2 423 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 GPR180Q86V85 440 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 C7orf31Q8N865 590 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.46□□□□□ -0.57
SCLT1-201ENST00000281142 ISL2Q96A47 359 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 ASB9Q96DX5 294 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 DEFB118Q96PH6 123 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 OSBPL11Q9BXB4 747 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 C1QTNF1Q9BXJ1 281 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 SPC25Q9HBM1 224 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 PNPLA3Q9NST1 481 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 SLC38A7Q9NVC3 462 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 UBP1Q9NZI7 540 aa11.46□□□□□ -0.57
SCLT1-201ENST00000281142 A0A1W2PPW3 197 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 ACKR2O00590 384 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 DLX3O60479 287 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 F2P00734 622 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 PAX3P23760 479 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 KCNA10Q16322 511 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 ZNF280DQ6N043 979 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 DHRS4L2Q6PKH6 230 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 CXCL17Q6UXB2 119 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 DNAAF3Q8N9W5 541 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 OR9I1Q8NGQ6 314 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 BIRC8Q96P09 236 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 NT5C1AQ9BXI3 368 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 MUC3BQ9H195 1237 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 DPEP3Q9H4B8 488 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 TRPC7Q9HCX4 862 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 CCDC167Q9P0B6 97 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 RUVBL2Q9Y230 463 aaKnown RBP11.46□□□□□ -0.58
SCLT1-201ENST00000281142 NUP205Q92621 2012 aa11.46□□□□□ -0.58
SCLT1-201ENST00000281142 SCN10AQ9Y5Y9 1956 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 SDHDO14521 159 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 TPST1O60507 370 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 TADA2AO75478 443 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 ASGR1P07306 291 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 C8BP07358 591 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 CST5P28325 142 aaPredicted RBP11.45□□□□□ -0.58
SCLT1-201ENST00000281142 NR2C2P49116 596 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 RHDQ02161 417 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 SLC10A6Q3KNW5 377 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 NHSL2Q5HYW2 709 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 SPANXN3Q5MJ09 141 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 TSTD2Q5T7W7 516 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 IER5Q5VY09 327 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 ZYG11AQ6WRX3 759 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 ZBTB49Q6ZSB9 765 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 CHST15Q7LFX5 561 aaPredicted RBP11.45□□□□□ -0.58
SCLT1-201ENST00000281142 GPR141Q7Z602 305 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 SLC41A1Q8IVJ1 513 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 FSTL5Q8N475 847 aaPredicted RBP11.45□□□□□ -0.58
SCLT1-201ENST00000281142 KDM1BQ8NB78 822 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 SMOXQ9NWM0 555 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 BCAP29Q9UHQ4 241 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 CNOT11Q9UKZ1 510 aaKnown RBP11.45□□□□□ -0.58
SCLT1-201ENST00000281142 VANGL2Q9ULK5 521 aa11.45□□□□□ -0.58
SCLT1-201ENST00000281142 TANC1Q9C0D5 1861 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms