RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ERFP50548 548 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 CSE1LP55060 971 aaKnown RBP18.11■□□□□ 0.49
CAPN1-201ENST00000279247 TAS2R39P59534 338 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 E2F5Q15329 346 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 TMCO4Q5TGY1 634 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 CARNMT1Q8N4J0 409 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 PPP4R1Q8TF05 950 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 RMDN1Q96DB5 314 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 TBATAQ96M53 351 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 TTLL2Q9BWV7 592 aa18.11■□□□□ 0.49
CAPN1-201ENST00000279247 AGO1Q9UL18 857 aaKnown RBP18.11■□□□□ 0.49
CAPN1-201ENST00000279247 HEATR9A2RTY3 570 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 SNAP91O60641 907 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 CCDC15Q0P6D6 951 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 ARMC5Q96C12 935 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 NXNL1Q96CM4 212 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 GPR22Q99680 433 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 PRAMEF11O60813 436 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 SLC35E2BP0CK96 405 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 PRSS56P0CW18 603 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 OXCT1P55809 520 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 KDSRQ06136 332 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 OR13C4Q8NGS5 318 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 TOX2Q96NM4 488 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 TMEM106CQ9BVX2 250 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 CINPQ9BW66 212 aaPredicted RBP18.1■□□□□ 0.49
CAPN1-201ENST00000279247 NOD2Q9HC29 1040 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 MAN1C1Q9NR34 630 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 G3BP2Q9UN86 482 aaKnown RBP18.1■□□□□ 0.49
CAPN1-201ENST00000279247 BACE2Q9Y5Z0 518 aa18.1■□□□□ 0.49
CAPN1-201ENST00000279247 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 DIAPH2O60879 1101 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 SNNO75324 88 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 HSPA4LO95757 839 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 SERPINE1P05121 402 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 STMN1P16949 149 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 HOXD9P28356 352 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 KPNA1P52294 538 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 CYP4F8P98187 520 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 ZNF177Q13360 481 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 UBAP2LQ14157 1087 aaKnown RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 CSHL1Q14406 222 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 TSTD2Q5T7W7 516 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 RNF219Q5W0B1 726 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 WDR75Q8IWA0 830 aaKnown RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 SLC39A11Q8N1S5 342 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 DNAJC1Q96KC8 554 aaKnown RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 ACE2Q9BYF1 805 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 SEZ6LQ9BYH1 1024 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 TREX1Q9NSU2 369 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 PCDHGC4Q9Y5F7 938 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 CFAP73A6NFT4 308 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 TEX28O15482 410 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 TGDSO95455 350 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 MPOP05164 745 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 CHRNGP07510 517 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 CD151P48509 253 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 SNCBQ16143 134 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 ASRGL1Q7L266 308 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 PAF1Q8N7H5 531 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 CCNYL1Q8N7R7 359 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 OR13J1Q8NGT2 312 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 PIWIL2Q8TC59 973 aaKnown RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 SLC7A6OSQ96CW6 309 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 ZNF334Q9HCZ1 680 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 MARCH4Q9P2E8 410 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 ACOT9Q9Y305 439 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 REV3LO60673 3130 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 ANKRD12Q6UB98 2062 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 CDK18Q07002 472 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 FSCBQ5H9T9 825 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 RABGAP1LQ5R372 815 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 LONP2Q86WA8 852 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 UTP4Q969X6 686 aaKnown RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 SKA1Q96BD8 255 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 TBC1D10AQ9BXI6 508 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 CYP4F12Q9HCS2 524 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 ARHGEF3Q9NR81 526 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 SPG21Q9NZD8 308 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 XPR1Q9UBH6 696 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 UBA2Q9UBT2 640 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-201ENST00000279247 FIS1Q9Y3D6 152 aa18.09■□□□□ 0.49
CAPN1-201ENST00000279247 NEMP2A6NFY4 417 aa18.08■□□□□ 0.49
CAPN1-201ENST00000279247 H0Y626 953 aa18.08■□□□□ 0.49
CAPN1-201ENST00000279247 C1RP00736 705 aa18.08■□□□□ 0.49
CAPN1-201ENST00000279247 SERPINF2P08697 491 aa18.08■□□□□ 0.49
CAPN1-201ENST00000279247 MAPKAPK2P49137 400 aa18.08■□□□□ 0.49
CAPN1-201ENST00000279247 PLK1P53350 603 aa18.08■□□□□ 0.49
CAPN1-201ENST00000279247 YBEYP58557 167 aaPredicted RBP18.08■□□□□ 0.49
CAPN1-201ENST00000279247 NECAB2Q7Z6G3 386 aa18.08■□□□□ 0.49
CAPN1-201ENST00000279247 FSTL5Q8N475 847 aaPredicted RBP18.08■□□□□ 0.49
CAPN1-201ENST00000279247 ZNF781Q8N8C0 355 aa18.08■□□□□ 0.49
CAPN1-201ENST00000279247 OR6K2Q8NGY2 324 aa18.08■□□□□ 0.49
CAPN1-201ENST00000279247 ZNF398Q8TD17 642 aa18.08■□□□□ 0.49
CAPN1-201ENST00000279247 NSMCE3Q96MG7 304 aa18.08■□□□□ 0.49
CAPN1-201ENST00000279247 NEMP1O14524 444 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 TBL1XO60907 577 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 ABLIM3O94929 683 aa18.08■□□□□ 0.48
CAPN1-201ENST00000279247 ESRRAP11474 423 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-201ENST00000279247 NAGLUP54802 743 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms