RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 EBF3Q9H4W6 596 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 TASP1Q9H6P5 420 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 WDCPQ9H6R7 721 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 GOLGA2P5Q9HBQ8 144 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 CHRAC1Q9NRG0 131 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 IARS2Q9NSE4 1012 aaKnown RBP13.07□□□□□ -0.32
C9orf3-201ENST00000277198 DDIT4Q9NX09 232 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 NDUFA13Q9P0J0 144 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 OR12D3Q9UGF7 316 aa13.07□□□□□ -0.32
C9orf3-201ENST00000277198 TRIP11Q15643 1979 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 H3BNX3 289 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 AP1G2O75843 785 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 ANXA9O76027 345 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 CSPG5O95196 566 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 CCNCP24863 283 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 GRIA4P48058 902 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 IRF9Q00978 393 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 FOXB2Q5VYV0 432 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 PKN3Q6P5Z2 889 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 FAM35AQ86V20 835 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 NETO2Q8NC67 525 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 MAPK15Q8TD08 544 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 DLG3Q92796 817 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 ZNF689Q96CS4 500 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-201ENST00000277198 CCDC124Q96CT7 223 aaKnown RBP13.06□□□□□ -0.32
C9orf3-201ENST00000277198 ATXN7L3BQ96GX2 97 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 TUBGCP5Q96RT8 1024 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 FTHL17Q9BXU8 183 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 OXCT2Q9BYC2 517 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-201ENST00000277198 ZNF385DQ9H6B1 395 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 CAB39LQ9H9S4 337 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 CRTAC1Q9NQ79 661 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 ANLNQ9NQW6 1124 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-201ENST00000277198 CDH9Q9ULB4 789 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 SLC39A10Q9ULF5 831 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 MTCH2Q9Y6C9 303 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 TSC2P49815 1807 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 MUC3AQ02505 3323 aa13.06□□□□□ -0.32
C9orf3-201ENST00000277198 PDCD11Q14690 1871 aaKnown RBP13.06□□□□□ -0.32
C9orf3-201ENST00000277198 MYO7AQ13402 2215 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 TARM1B6A8C7 271 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 I6L893 689 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 PTGESO14684 152 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 CLGNO14967 610 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 GPR182O15218 404 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 RNASEH1O60930 286 aaKnown RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 KPNA2P52292 529 aaKnown RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 CYLC2Q14093 348 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 USP10Q14694 798 aaKnown RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 GRM3Q14832 879 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 DLG2Q15700 870 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 SFT2D3Q587I9 215 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 THEMIS2Q5TEJ8 643 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 POTEHQ6S545 545 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 PGAM4Q8N0Y7 254 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 PQLC1Q8N2U9 271 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 LZTR1Q8N653 840 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 CNTD1Q8N815 330 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 ICA1LQ8NDH6 482 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 PHC3Q8NDX5 983 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 NCSTNQ92542 709 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 AZIN2Q96A70 460 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 SENP8Q96LD8 212 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 OR52B2Q96RD2 323 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 FCRL5Q96RD9 977 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 SMOQ99835 787 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 Q9H521 79 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 CSNK1G1Q9HCP0 422 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 MAN1C1Q9NR34 630 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 RGS18Q9NS28 235 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 RNF19AQ9NV58 838 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 HACD3Q9P035 362 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 CDYLQ9Y232 598 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 ACOT9Q9Y305 439 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 MRPL42Q9Y6G3 142 aaKnown RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 DENRO43583 198 aaKnown RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 NPHS1O60500 1241 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 LRIG2O94898 1065 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 ZCCHC18P0CG32 403 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 NMBRP28336 390 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 MSLNQ13421 630 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 OLIG2Q13516 323 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 RBBP5Q15291 538 aaKnown RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 TRIP10Q15642 601 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 LSM12Q3MHD2 195 aaKnown RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 MMEL1Q495T6 779 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 LIN52Q52LA3 116 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 ARL13AQ5H913 290 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 TCHHL1Q5QJ38 904 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 KIAA0319Q5VV43 1072 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 BNC2Q6ZN30 1099 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-201ENST00000277198 NPAS4Q8IUM7 802 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 DSELQ8IZU8 1212 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 SMARCD1Q96GM5 515 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 EPB41L1Q9H4G0 881 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 EFCAB1Q9HAE3 211 aa13.05□□□□□ -0.32
C9orf3-201ENST00000277198 TRPC5OSA6NMA1 111 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 GRID2O43424 1007 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms