RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 MAGEE2Q8TD90 523 aaPredicted RBP13.03□□□□□ -0.32
COL8A1-202ENST00000273342 TFAP2CQ92754 450 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 FAM167AQ96KS9 214 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 COG8Q96MW5 612 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 MTG1Q9BT17 334 aaPredicted RBP13.03□□□□□ -0.32
COL8A1-202ENST00000273342 ADI1Q9BV57 179 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 UPF3AQ9H1J1 476 aaKnown RBP13.03□□□□□ -0.32
COL8A1-202ENST00000273342 ASB7Q9H672 318 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 CDHR5Q9HBB8 845 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 NCKIPSDQ9NZQ3 722 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 VTI1BQ9UEU0 232 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 DSEQ9UL01 958 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 COQ6Q9Y2Z9 468 aa13.03□□□□□ -0.32
COL8A1-202ENST00000273342 CITO14578 2027 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 A0A087WXM4 84 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 C1orf232A0A0U1RR37 186 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 I6L893 689 aaPredicted RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 SRP72O76094 671 aaKnown RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 STMN1P16949 149 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 TKTP29401 623 aaKnown RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 SLC7A1P30825 629 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 GLUD2P49448 558 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 SFSWAPQ12872 951 aaKnown RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 RAB39AQ14964 217 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 FAM83EQ2M2I3 478 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 FUT11Q495W5 492 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 ZNF789Q5FWF6 425 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 RBM20Q5T481 1227 aaKnown RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 NANOGP8Q6NSW7 305 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 LDB1Q86U70 411 aaPredicted RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 SHCBP1Q8NEM2 672 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 CENPIQ92674 756 aaPredicted RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 C11orf84Q9BUA3 381 aaPredicted RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 IL22Q9GZX6 179 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 EIF2B3Q9NR50 452 aaKnown RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 PRMT7Q9NVM4 692 aaPredicted RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 HOXC10Q9NYD6 342 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 IGSF9Q9P2J2 1179 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 CACNG4Q9UBN1 327 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 SUCOQ9UBS9 1254 aaKnown RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 KIAA1257Q9ULG3 409 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 PADI4Q9UM07 663 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 ZNF232Q9UNY5 417 aa13.02□□□□□ -0.32
COL8A1-202ENST00000273342 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.32
COL8A1-202ENST00000273342 CLOCKO15516 846 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 FUCA1P04066 466 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 C8BP07358 591 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 SNRPB2P08579 225 aaKnown RBP13.02□□□□□ -0.33
COL8A1-202ENST00000273342 MATKP42679 507 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 SLC12A2P55011 1212 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 TPI1P60174 286 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 BST2Q10589 180 aaKnown RBP13.02□□□□□ -0.33
COL8A1-202ENST00000273342 ITGADQ13349 1161 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 OTUD3Q5T2D3 398 aaPredicted RBP13.02□□□□□ -0.33
COL8A1-202ENST00000273342 SNX29P2Q8IUI4 249 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 EPHX4Q8IUS5 362 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 ZC3H7AQ8IWR0 971 aaKnown RBP13.02□□□□□ -0.33
COL8A1-202ENST00000273342 PLEKHA8Q96JA3 519 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 GPR22Q99680 433 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 ANKRD60Q9BZ19 345 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 RPF2Q9H7B2 306 aaKnown RBP13.02□□□□□ -0.33
COL8A1-202ENST00000273342 AS3MTQ9HBK9 375 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 CORINQ9Y5Q5 1042 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 IGKV6-21A0A0C4DH24 114 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 PPP6CO00743 305 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 EI24O14681 340 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 NRP2O60462 931 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 H2AFYO75367 372 aaKnown RBP13.02□□□□□ -0.33
COL8A1-202ENST00000273342 CXCR3P49682 368 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 ZBED5Q49AG3 693 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 ZNF470Q6ECI4 717 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 ARHGAP36Q6ZRI8 547 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 MOB2Q70IA6 237 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 RETREG3Q86VR2 466 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 DDHD1Q8NEL9 900 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 DNERQ8NFT8 737 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 EDEM1Q92611 657 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 SEPHS2Q99611 448 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 RHOJQ9H4E5 214 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 MID2Q9UJV3 735 aa13.02□□□□□ -0.33
COL8A1-202ENST00000273342 ZNF638Q14966 1978 aaKnown RBP13.01□□□□□ -0.33
COL8A1-202ENST00000273342 TRPC5OSA6NMA1 111 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 TRIM24O15164 1050 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 PMPCBO75439 489 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 SUPT7LO94864 414 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 CD97P48960 835 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 KPNA1P52294 538 aaPredicted RBP13.01□□□□□ -0.33
COL8A1-202ENST00000273342 RAB10P61026 200 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 RELAQ04206 551 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 KCTD8Q6ZWB6 473 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 CENPSQ8N2Z9 138 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 AGBL3Q8NEM8 1001 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 BPIFB6Q8NFQ5 453 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 ISL2Q96A47 359 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 BIRC8Q96P09 236 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 TCF12Q99081 682 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 NPLQ9BXD5 320 aaPredicted RBP13.01□□□□□ -0.33
COL8A1-202ENST00000273342 CASS4Q9NQ75 786 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 GJD2Q9UKL4 321 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 FUOMA2VDF0 154 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms