RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 CATSPER4Q7RTX7 472 aa23.99■■□□□ 1.43
RETREG2-201ENST00000273048 PIWIL4Q7Z3Z4 852 aaKnown RBP23.99■■□□□ 1.43
RETREG2-201ENST00000273048 CD300AQ9UGN4 299 aa23.99■■□□□ 1.43
RETREG2-201ENST00000273048 EBF1Q9UH73 591 aa23.99■■□□□ 1.43
RETREG2-201ENST00000273048 AURKAO14965 403 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 NCAM2O15394 837 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 GNAO1P09471 354 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 GALNT2Q10471 571 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 CSHL1Q14406 222 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 NHSL2Q5HYW2 709 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 PKN3Q6P5Z2 889 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 CLEC20AQ6ZU45 233 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 RANBP9Q96S59 729 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 ULBP1Q9BZM6 244 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 FAM49AQ9H0Q0 323 aaPredicted RBP23.98■■□□□ 1.43
RETREG2-201ENST00000273048 RRN3Q9NYV6 651 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 IPO11Q9UI26 975 aaKnown RBP23.98■■□□□ 1.43
RETREG2-201ENST00000273048 SAC3D1A6NKF1 404 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 MRASO14807 208 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 SOX4Q06945 474 aaPredicted RBP23.98■■□□□ 1.43
RETREG2-201ENST00000273048 SQLEQ14534 574 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 ARHGAP36Q6ZRI8 547 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 PNPLA1Q8N8W4 532 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 CANT1Q8WVQ1 401 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 TOP1MTQ969P6 601 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 ANKRD60Q9BZ19 345 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 CLK4Q9HAZ1 481 aaKnown RBP23.98■■□□□ 1.43
RETREG2-201ENST00000273048 RBPJLQ9UBG7 517 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 SARDHQ9UL12 918 aa23.98■■□□□ 1.43
RETREG2-201ENST00000273048 UBQLN1Q9UMX0 589 aaKnown RBP23.98■■□□□ 1.43
RETREG2-201ENST00000273048 MRPL42Q9Y6G3 142 aaKnown RBP23.98■■□□□ 1.43
RETREG2-201ENST00000273048 LTBP3Q9NS15 1303 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 TSC2P49815 1807 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 ZSCAN9O15535 394 aaPredicted RBP23.97■■□□□ 1.43
RETREG2-201ENST00000273048 AKAP10O43572 662 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 YWHAQP27348 245 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 SLC7A2P52569 658 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 PRKCQQ04759 706 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 ALKAL1Q6UXT8 129 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 IPMKQ8NFU5 416 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 TNIP3Q96KP6 325 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 HNRNPABQ99729 332 aaKnown RBP23.97■■□□□ 1.43
RETREG2-201ENST00000273048 MRPL57Q9BQC6 102 aaKnown RBP23.97■■□□□ 1.43
RETREG2-201ENST00000273048 C16orf70Q9BSU1 422 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 MRPL40Q9NQ50 206 aaKnown RBP23.97■■□□□ 1.43
RETREG2-201ENST00000273048 DDIT4Q9NX09 232 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 FAF1Q9UNN5 650 aaPredicted RBP23.97■■□□□ 1.43
RETREG2-201ENST00000273048 TDRKHQ9Y2W6 561 aaKnown RBP23.97■■□□□ 1.43
RETREG2-201ENST00000273048 ATP6AP2A0A1C7CYW4 349 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 ATP6AP2O75787 350 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 SNRPB2P08579 225 aaKnown RBP23.97■■□□□ 1.43
RETREG2-201ENST00000273048 YBX3P16989 372 aaKnown RBP eCLIP23.97■■□□□ 1.43
RETREG2-201ENST00000273048 ATP5F1P24539 256 aaPredicted RBP23.97■■□□□ 1.43
RETREG2-201ENST00000273048 GRIA3P42263 894 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 ENTPD1P49961 510 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 CTBSQ01459 385 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 TRAP1Q12931 704 aaKnown RBP23.97■■□□□ 1.43
RETREG2-201ENST00000273048 KDELC2Q7Z4H8 507 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 CLVS1Q8IUQ0 354 aaPredicted RBP23.97■■□□□ 1.43
RETREG2-201ENST00000273048 MAML3Q96JK9 1138 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 MED10Q9BTT4 135 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 FBXW11Q9UKB1 542 aa23.97■■□□□ 1.43
RETREG2-201ENST00000273048 SMIM28A0A1B0GU29 152 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 SLC25A27O95847 323 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 HNRNPCP07910 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
RETREG2-201ENST00000273048 NCAM1P13591 858 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 UGT1A6P19224 532 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 IGFBP6P24592 240 aaPredicted RBP23.96■■□□□ 1.43
RETREG2-201ENST00000273048 ARCN1P48444 511 aaKnown RBP23.96■■□□□ 1.43
RETREG2-201ENST00000273048 PLOD1Q02809 727 aaPredicted RBP23.96■■□□□ 1.43
RETREG2-201ENST00000273048 PRPSAP1Q14558 356 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 UGP2Q16851 508 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 PCID2Q5JVF3 399 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 CUZD1Q86UP6 607 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 KLHL23Q8NBE8 558 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 PBXIP1Q96AQ6 731 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 OTUD5Q96G74 571 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 UHRF1Q96T88 793 aaPredicted RBP23.96■■□□□ 1.43
RETREG2-201ENST00000273048 MEAF6Q9HAF1 191 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 FBRSL1Q9HCM7 1045 aaKnown RBP23.96■■□□□ 1.43
RETREG2-201ENST00000273048 SQORQ9Y6N5 450 aa23.96■■□□□ 1.43
RETREG2-201ENST00000273048 TMX2-CTNND1H3BSU7 103 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 MTSS1O43312 755 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 FOXD2O60548 495 aaPredicted RBP23.95■■□□□ 1.43
RETREG2-201ENST00000273048 HUS1O60921 280 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 GPC4O75487 556 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 TSPAN8P19075 237 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 ATP6V1B2P21281 511 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 LRPAP1P30533 357 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 MAPRE2Q15555 327 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 GRIK4Q16099 956 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 RBM20Q5T481 1227 aaKnown RBP23.95■■□□□ 1.43
RETREG2-201ENST00000273048 ZNF470Q6ECI4 717 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 ARMCX2Q7L311 632 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 GPRIN1Q7Z2K8 1008 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 FNDC8Q8TC99 324 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 PHF21BQ96EK2 531 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 ZNF419Q96HQ0 510 aaPredicted RBP23.95■■□□□ 1.43
RETREG2-201ENST00000273048 LRCH3Q96II8 777 aa23.95■■□□□ 1.43
RETREG2-201ENST00000273048 DCUN1D5Q9BTE7 237 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms