RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 LDB2O43679 373 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 VAPBO95292 243 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 LIMK2P53671 638 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 CDK18Q07002 472 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 GPM6BQ13491 265 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 PDE1CQ14123 709 aaPredicted RBP12.24□□□□□ -0.45
SDE2-201ENST00000272091 SEPT6Q14141 434 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 TSTD2Q5T7W7 516 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 RGS9BPQ6ZS82 235 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 MFSD6LQ8IWD5 586 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 DENND6AQ8IWF6 608 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 DCLK2Q8N568 766 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 VN1R2Q8NFZ6 395 aa12.24□□□□□ -0.45
SDE2-201ENST00000272091 INTS6Q9UL03 887 aaKnown RBP12.24□□□□□ -0.45
SDE2-201ENST00000272091 K7ERQ8 282 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 HNRNPA1P09651 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
SDE2-201ENST00000272091 CEBPBP17676 345 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 CD70P32970 193 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 IL9RQ01113 521 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 LMAN2Q12907 356 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 LGSNQ5TDP6 509 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 ASTLQ6HA08 431 aaPredicted RBP12.23□□□□□ -0.45
SDE2-201ENST00000272091 FSTL4Q6MZW2 842 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 GRASPQ7Z6J2 395 aaPredicted RBP12.23□□□□□ -0.45
SDE2-201ENST00000272091 MFN1Q8IWA4 741 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 DDI1Q8WTU0 396 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 PTPRN2Q92932 1015 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 VOPP1Q96AW1 172 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 ATXN7L3BQ96GX2 97 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 TASP1Q9H6P5 420 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 PLLPQ9Y342 182 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 EPOPA6NHQ4 379 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 INSIG1O15503 277 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 ALADP13716 330 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 MPP1Q00013 466 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 PPM1JQ5JR12 505 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 CES4AQ5XG92 561 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 KIAA0930Q6ICG6 404 aaPredicted RBP12.23□□□□□ -0.45
SDE2-201ENST00000272091 CMC1Q7Z7K0 106 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 PNPLA1Q8N8W4 532 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 NUDCD1Q96RS6 583 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 FCF1Q9Y324 198 aaKnown RBP12.23□□□□□ -0.45
SDE2-201ENST00000272091 E2F8A0AVK6 867 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 CCL22O00626 93 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 GSRP00390 522 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 VIMP08670 466 aaKnown RBP12.23□□□□□ -0.45
SDE2-201ENST00000272091 DDX6P26196 483 aaKnown RBP eCLIP12.23□□□□□ -0.45
SDE2-201ENST00000272091 SCNN1BP51168 640 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 ARSDP51689 593 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 CDH18Q13634 790 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 ZNF77Q15935 545 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 MPP7Q5T2T1 576 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 DCAF4L2Q8NA75 395 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 SEC16BQ96JE7 1060 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 TDRD1Q9BXT4 1180 aaKnown RBP12.23□□□□□ -0.45
SDE2-201ENST00000272091 PRKD2Q9BZL6 878 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 SLC13A1Q9BZW2 595 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 VPS28Q9UK41 221 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 SPO11Q9Y5K1 396 aa12.23□□□□□ -0.45
SDE2-201ENST00000272091 HEATR9A2RTY3 570 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 COPEO14579 308 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 PDHA1P08559 390 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 SERPINF2P08697 491 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 GBP2P32456 591 aaPredicted RBP12.22□□□□□ -0.45
SDE2-201ENST00000272091 CRHR1P34998 444 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 SLC1A2P43004 574 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 PGGT1BP53609 377 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 SF3A3Q12874 501 aaKnown RBP eCLIP12.22□□□□□ -0.45
SDE2-201ENST00000272091 PTPRCAPQ14761 206 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 ZKSCAN8Q15776 578 aaPredicted RBP12.22□□□□□ -0.45
SDE2-201ENST00000272091 MPPE1Q53F39 396 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 NDUFAF2Q8N183 169 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 CAB39LQ9H9S4 337 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 CHKBQ9Y259 395 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 ARL5AQ9Y689 179 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 CCDC195A0A1B0GUA6 201 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 SMAD6O43541 496 aaKnown RBP12.22□□□□□ -0.45
SDE2-201ENST00000272091 ZNF821O75541 412 aaPredicted RBP12.22□□□□□ -0.45
SDE2-201ENST00000272091 EPOP01588 193 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 AHSGP02765 367 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 PIRTP0C851 137 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 USP4Q13107 963 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 DNAJC3Q13217 504 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 CTBP1Q13363 440 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 DLG2Q15700 870 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 NCEH1Q6PIU2 408 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 ZC3HC1Q86WB0 502 aaKnown RBP12.22□□□□□ -0.45
SDE2-201ENST00000272091 FIBINQ8TAL6 211 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 ING5Q8WYH8 240 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 SLCO1B3Q9NPD5 702 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 SNX15Q9NRS6 342 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 AURKAO14965 403 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 PAPLNO95428 1278 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 FGF19O95750 216 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 POU2F2P09086 479 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 HLA-DPA1P20036 260 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 CSE1LP55060 971 aaKnown RBP12.22□□□□□ -0.45
SDE2-201ENST00000272091 TRAF2Q12933 501 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 KCNC3Q14003 757 aa12.22□□□□□ -0.45
SDE2-201ENST00000272091 PTPRRQ15256 657 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms