RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 EPN3Q9H201 632 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 LINC00597Q9H2U6 94 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 SCUBE2Q9NQ36 999 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 SPHK2Q9NRA0 654 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 NKIRAS1Q9NYS0 192 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 MARK1Q9P0L2 795 aa16.53■□□□□ 0.24
TPM1-201ENST00000267996 MYOFQ9NZM1 2061 aa16.52■□□□□ 0.24
TPM1-201ENST00000267996 SLC9A3R1O14745 358 aaPredicted RBP16.52■□□□□ 0.23
TPM1-201ENST00000267996 SIN3BO75182 1162 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 MT-CO1P00395 513 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 ALADP13716 330 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 CCNFP41002 786 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 WDR4P57081 412 aaKnown RBP16.52■□□□□ 0.23
TPM1-201ENST00000267996 SLC20A2Q08357 652 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 HSP90AA5PQ58FG0 334 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 TSTD2Q5T7W7 516 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 GRTP1Q5TC63 336 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 NCEH1Q6PIU2 408 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 ADGRG2Q8IZP9 1017 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 CELF5Q8N6W0 485 aaKnown RBP16.52■□□□□ 0.23
TPM1-201ENST00000267996 ZNF557Q8N988 423 aaPredicted RBP16.52■□□□□ 0.23
TPM1-201ENST00000267996 ANKRD42Q8N9B4 389 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 EXOC2Q96KP1 924 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 LRRC3BQ96PB8 259 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 TDRD1Q9BXT4 1180 aaKnown RBP16.52■□□□□ 0.23
TPM1-201ENST00000267996 ABCB8Q9NUT2 735 aa16.52■□□□□ 0.23
TPM1-201ENST00000267996 C2orf16Q68DN1 1984 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 PRLP01236 227 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 HLA-FP30511 346 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 GBP2P32456 591 aaPredicted RBP16.51■□□□□ 0.23
TPM1-201ENST00000267996 BMP8BP34820 402 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 BMPR2Q13873 1038 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 CNGA3Q16281 694 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 PITRM1Q5JRX3 1037 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 NLRP9Q7RTR0 991 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 METTL3Q86U44 580 aaKnown RBP16.51■□□□□ 0.23
TPM1-201ENST00000267996 AGAP2Q99490 1192 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 MKS1Q9NXB0 559 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 NSMCE4AQ9NXX6 385 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 SLC2A6Q9UGQ3 507 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 RIMKLBQ9ULI2 386 aa16.51■□□□□ 0.23
TPM1-201ENST00000267996 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 GMNCA6NCL1 334 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 RFXAPO00287 272 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 LDB2O43679 373 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 ZWINTO95229 277 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 ASMTLO95671 621 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 GLP2RO95838 553 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 PYGBP11216 843 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 PAMP19021 973 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 CA4P22748 312 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 RPA3P35244 121 aaPredicted RBP16.5■□□□□ 0.23
TPM1-201ENST00000267996 CSNK1DP48730 415 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 NEK3P51956 506 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 CSE1LP55060 971 aaKnown RBP16.5■□□□□ 0.23
TPM1-201ENST00000267996 LAMB3Q13751 1172 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 SEPT6Q14141 434 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 LY6G5CQ5SRR4 150 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 MROH9Q5TGP6 573 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 ASTLQ6HA08 431 aaPredicted RBP16.5■□□□□ 0.23
TPM1-201ENST00000267996 KIAA0907Q7Z7F0 614 aaPredicted RBP16.5■□□□□ 0.23
TPM1-201ENST00000267996 GPR149Q86SP6 731 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 NPAS3Q8IXF0 933 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 MGARPQ8TDB4 240 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 ACMSDQ8TDX5 336 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 CKAP2Q8WWK9 683 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 PEX13Q92968 403 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 PPP2R3CQ969Q6 453 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 ISL2Q96A47 359 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 RSPRY1Q96DX4 576 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 ZNF317Q96PQ6 595 aaPredicted RBP16.5■□□□□ 0.23
TPM1-201ENST00000267996 KLF6Q99612 283 aaPredicted RBP16.5■□□□□ 0.23
TPM1-201ENST00000267996 RBBP8Q99708 897 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 BBS2Q9BXC9 721 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 FCF1Q9Y324 198 aaKnown RBP16.5■□□□□ 0.23
TPM1-201ENST00000267996 RAI2Q9Y5P3 530 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 WNT6Q9Y6F9 365 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 CCDC78A2IDD5 438 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 GOLGA8RI6L899 631 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 K7ERQ8 282 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 TM9SF1O15321 606 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 VAPBO95292 243 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 ITGA2BP08514 1039 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 TYRP14679 529 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 SEC24CP53992 1094 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 RHOAP61586 193 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 AP1S1P61966 158 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 ACVR1Q04771 509 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 GALNT3Q14435 633 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 LRRC14Q15048 493 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 STRA8Q7Z7C7 330 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 SRLQ86TD4 932 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 RNF135Q8IUD6 432 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.5■□□□□ 0.23
TPM1-201ENST00000267996 BRSK1Q8TDC3 778 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 ATP2A3Q93084 1043 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 APOPT1Q96IL0 206 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 SLC2A11Q9BYW1 496 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 IARS2Q9NSE4 1012 aaKnown RBP16.5■□□□□ 0.23
TPM1-201ENST00000267996 TXNDC16Q9P2K2 825 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms