RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 ARRB2P32121 409 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 ITGA9Q13797 1035 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 USP10Q14694 798 aaKnown RBP13.71□□□□□ -0.21
VMP1-201ENST00000262291 PTPRRQ15256 657 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 HSF5Q4G112 596 aaPredicted RBP13.71□□□□□ -0.21
VMP1-201ENST00000262291 LINGO4Q6UY18 593 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 PTAR1Q7Z6K3 402 aaPredicted RBP13.71□□□□□ -0.21
VMP1-201ENST00000262291 NSMCE3Q96MG7 304 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 TTLL2Q9BWV7 592 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 OCEL1Q9H607 264 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 ENTPD7Q9NQZ7 604 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 ARHGEF3Q9NR81 526 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 MTF2Q9Y483 593 aaPredicted RBP13.71□□□□□ -0.21
VMP1-201ENST00000262291 EFEMP2O95967 443 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 FGF3P11487 239 aaPredicted RBP13.71□□□□□ -0.21
VMP1-201ENST00000262291 GJA1P17302 382 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 CCR10P46092 362 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 RGRP47804 291 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 ARCN1P48444 511 aaKnown RBP13.71□□□□□ -0.21
VMP1-201ENST00000262291 SERPINB8P50452 374 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 SESN3P58005 492 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 ZNF235Q14590 738 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 SIRPB2Q5JXA9 342 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 TXNDC8Q6A555 127 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 ZC3HC1Q86WB0 502 aaKnown RBP13.71□□□□□ -0.21
VMP1-201ENST00000262291 SLC39A11Q8N1S5 342 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 ARRDC2Q8TBH0 407 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 ZNF334Q9HCZ1 680 aaPredicted RBP13.71□□□□□ -0.21
VMP1-201ENST00000262291 MKS1Q9NXB0 559 aa13.71□□□□□ -0.21
VMP1-201ENST00000262291 MIA3Q5JRA6 1907 aa13.71□□□□□ -0.22
VMP1-201ENST00000262291 COL4A6Q14031 1691 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 ZBBXA8MT70 800 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 HAUS5O94927 633 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 ARSDP51689 593 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 OCRLQ01968 901 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 RING1Q06587 406 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 NAB1Q13506 487 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 THOC5Q13769 683 aaKnown RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 MBLAC2Q68D91 279 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 PDPK2PQ6A1A2 396 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 CNSTQ6PJW8 725 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 DNAJB7Q7Z6W7 309 aaPredicted RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 CEP97Q8IW35 865 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 LMNTD2Q8IXW0 634 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 RNF168Q8IYW5 571 aaPredicted RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 BLOC1S5Q8TDH9 187 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 C2orf15Q8WU43 125 aaKnown RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 KCTD4Q8WVF5 259 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 YME1L1Q96TA2 773 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 EBF4Q9BQW3 602 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 SEZ6LQ9BYH1 1024 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 SHCBP1LQ9BZQ2 653 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 BACE2Q9Y5Z0 518 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 TK2O00142 265 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 CBX4O00257 560 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 NRG2O14511 850 aaPredicted RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 T-ENOLP0DO92 83 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 SP100P23497 879 aaPredicted RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 SLC11A2P49281 568 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 SERPINH1P50454 418 aaKnown RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 AQP5P55064 265 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 WDR5P61964 334 aaKnown RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 SMARCB1Q12824 385 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 RBM20Q5T481 1227 aaKnown RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 ATG16L1Q676U5 607 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 KYAT3Q6YP21 454 aaKnown RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 OR6P1Q8NGX9 317 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 FAM81AQ8TBF8 368 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 UTP4Q969X6 686 aaKnown RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 FAM136AQ96C01 138 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 SGF29Q96ES7 293 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 SCYL1Q96KG9 808 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 TOX2Q96NM4 488 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 PNPOQ9NVS9 261 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 DCDC2Q9UHG0 476 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 AGO1Q9UL18 857 aaKnown RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 DNAJC16Q9Y2G8 782 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 FNDC3AQ9Y2H6 1198 aaKnown RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 ARL5AQ9Y689 179 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 DOCK6Q96HP0 2047 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 ABLIM3O94929 683 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 URODP06132 367 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 MBL2P11226 248 aaPredicted RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 GM2AP17900 193 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 ZXDBP98169 803 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 GNA12Q03113 381 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 CUL3Q13618 768 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 KLHDC8BQ8IXV7 354 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 ARL14EPQ8N8R7 260 aaPredicted RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 ACMSDQ8TDX5 336 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 ELMO2Q96JJ3 720 aa13.7□□□□□ -0.22
VMP1-201ENST00000262291 HBS1LQ9Y450 684 aaKnown RBP13.7□□□□□ -0.22
VMP1-201ENST00000262291 CHD7Q9P2D1 2997 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 SNAP91O60641 907 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 PRAMEF11O60813 436 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 ZNF189O75820 626 aaPredicted RBP13.69□□□□□ -0.22
VMP1-201ENST00000262291 DCTN3O75935 186 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 PRSS56P0CW18 603 aa13.69□□□□□ -0.22
VMP1-201ENST00000262291 BMP1P13497 986 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms