RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SLC6A18Q96N87 628 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 ORAI3Q9BRQ5 295 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 TRIM51Q9BSJ1 452 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 CIPCQ9C0C6 399 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 ELOVL2Q9NXB9 296 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 MYO9AB2RTY4 2548 aa13.57□□□□□ -0.24
SGCA-201ENST00000262018 ZNF487B1APH4 448 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 TERTO14746 1132 aaKnown RBP13.56□□□□□ -0.24
SGCA-201ENST00000262018 MDM4O15151 490 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 SASH3O75995 380 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 ECEL1O95672 775 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 TFE3P19532 575 aaPredicted RBP13.56□□□□□ -0.24
SGCA-201ENST00000262018 EPHA8P29322 1005 aaPredicted RBP13.56□□□□□ -0.24
SGCA-201ENST00000262018 ECHS1P30084 290 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 KCNJ1P48048 391 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 PGFP49763 221 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 GABREP78334 506 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 PDK2Q15119 407 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 E2F5Q15329 346 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 TRADDQ15628 312 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 SLC25A52Q3SY17 297 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 KAZNQ674X7 775 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 BBS12Q6ZW61 710 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 BHLHA9Q7RTU4 235 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 ATL2Q8NHH9 583 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 FAM71BQ8TC56 605 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 GRK7Q8WTQ7 553 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 IFT81Q8WYA0 676 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 HSPH1Q92598 858 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 FAM149B1Q96BN6 582 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 NPY6RQ99463 290 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 FRMD8P1Q9BZ68 369 aaPredicted RBP13.56□□□□□ -0.24
SGCA-201ENST00000262018 DPH1Q9BZG8 443 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 POPDC2Q9HBU9 364 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 CLIC5Q9NZA1 410 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 FEZ2Q9UHY8 353 aaPredicted RBP13.56□□□□□ -0.24
SGCA-201ENST00000262018 NFU1Q9UMS0 254 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 AHCTF1Q8WYP5 2266 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 YKT6O15498 198 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 DAPK3O43293 454 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 WNT1P04628 370 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 FYNP06241 537 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 IGHV4-34P06331 123 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 CD48P09326 243 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 GP1BBP13224 206 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 SULT1E1P49888 294 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 CDH6P55285 790 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 YWHAGP61981 247 aaKnown RBP eCLIP13.56□□□□□ -0.24
SGCA-201ENST00000262018 NFKB2Q00653 900 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 BNIP3Q12983 259 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 CASP8Q14790 479 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 OTUD1Q5VV17 481 aaPredicted RBP13.56□□□□□ -0.24
SGCA-201ENST00000262018 KIAA0895LQ68EN5 471 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 ATG14Q6ZNE5 492 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 MAP7D3Q8IWC1 876 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 LSMEM2Q8N112 164 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 ATG4AQ8WYN0 398 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 CDK5RAP1Q96SZ6 601 aaKnown RBP13.56□□□□□ -0.24
SGCA-201ENST00000262018 SNRNP25Q9BV90 132 aaKnown RBP13.56□□□□□ -0.24
SGCA-201ENST00000262018 AASDHPPTQ9NRN7 309 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.56□□□□□ -0.24
SGCA-201ENST00000262018 STAP1Q9ULZ2 295 aa13.56□□□□□ -0.24
SGCA-201ENST00000262018 DRG1Q9Y295 367 aaKnown RBP13.56□□□□□ -0.24
SGCA-201ENST00000262018 CKAP5Q14008 2032 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 A0A1W2PQH9 124 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 FAM47DPA6NHR8 397 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 YJEFN3A6XGL0 299 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 E7ENQ6 273 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 K7ENP7 123 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 LIASO43766 372 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 LTFP02788 710 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 ATP5C1P36542 298 aaKnown RBP13.55□□□□□ -0.24
SGCA-201ENST00000262018 ARRB1P49407 418 aaPredicted RBP13.55□□□□□ -0.24
SGCA-201ENST00000262018 ERVPABLB-1P60509 514 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 CAMK2GQ13555 558 aaPredicted RBP13.55□□□□□ -0.24
SGCA-201ENST00000262018 SNX1Q13596 522 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 PTK6Q13882 451 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 DPYSL3Q14195 570 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 DCAF6Q58WW2 860 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 ERMARDQ5T6L9 678 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 SCYL2Q6P3W7 929 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 INO80CQ6PI98 192 aaPredicted RBP13.55□□□□□ -0.24
SGCA-201ENST00000262018 BEND5Q7L4P6 421 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 SCD5Q86SK9 330 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 TADA2BQ86TJ2 420 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 ZNF276Q8N554 614 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 ZNF366Q8N895 744 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 TTC13Q8NBP0 860 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 TRIM62Q9BVG3 475 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 NMUR1Q9HB89 426 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 SGK2Q9HBY8 427 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 PCDH18Q9HCL0 1135 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 RRN3Q9NYV6 651 aa13.55□□□□□ -0.24
SGCA-201ENST00000262018 TP53BP1Q12888 1972 aaPredicted RBP13.54□□□□□ -0.24
SGCA-201ENST00000262018 A0A1W2PPC4 97 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 PENKP01210 267 aaPredicted RBP13.54□□□□□ -0.24
SGCA-201ENST00000262018 DNTTP04053 509 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 ACP1P24666 158 aa13.54□□□□□ -0.24
SGCA-201ENST00000262018 TNNT3P45378 269 aaPredicted RBP13.54□□□□□ -0.24
SGCA-201ENST00000262018 RPS14P62263 151 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms