RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CHST13Q8NET6 341 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 UTP15Q8TED0 518 aaKnown RBP16.34■□□□□ 0.21
SREBF1-201ENST00000261646 ACOX2Q99424 681 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 PCDH12Q9NPG4 1184 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 TELO2Q9Y4R8 837 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 GMEB1Q9Y692 573 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 PARP4Q9UKK3 1724 aaKnown RBP16.34■□□□□ 0.21
SREBF1-201ENST00000261646 PLA2G6O60733 806 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 MYO1DO94832 1006 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 MAGEA8P43361 318 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 TIGD2Q4W5G0 525 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 C6orf183Q5T699 404 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 COPS5Q92905 334 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 PRKD2Q9BZL6 878 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 GOLGA4Q13439 2230 aaKnown RBP16.33■□□□□ 0.21
SREBF1-201ENST00000261646 BUD23O43709 281 aaKnown RBP16.33■□□□□ 0.21
SREBF1-201ENST00000261646 RFPL1O75677 317 aa16.33■□□□□ 0.21
SREBF1-201ENST00000261646 ADSLP30566 484 aaPredicted RBP16.33■□□□□ 0.21
SREBF1-201ENST00000261646 GJC2Q5T442 439 aaPredicted RBP16.33■□□□□ 0.21
SREBF1-201ENST00000261646 OGFOD2Q6N063 350 aa16.33■□□□□ 0.21
SREBF1-201ENST00000261646 KLHL35Q6PF15 583 aa16.33■□□□□ 0.21
SREBF1-201ENST00000261646 HM13Q8TCT9 377 aa16.33■□□□□ 0.21
SREBF1-201ENST00000261646 PLEKHA8Q96JA3 519 aa16.33■□□□□ 0.21
SREBF1-201ENST00000261646 VAT1Q99536 393 aa16.33■□□□□ 0.21
SREBF1-201ENST00000261646 VTA1Q9NP79 307 aa16.33■□□□□ 0.21
SREBF1-201ENST00000261646 PNMA8BQ9ULN7 279 aaPredicted RBP16.33■□□□□ 0.21
SREBF1-201ENST00000261646 DYNC1LI2O43237 492 aaPredicted RBP16.33■□□□□ 0.2
SREBF1-201ENST00000261646 ALOX5P09917 674 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 NOTUMQ6P988 496 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 TBC1D21Q8IYX1 336 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 FSTL5Q8N475 847 aaPredicted RBP16.33■□□□□ 0.2
SREBF1-201ENST00000261646 ELOVL4Q9GZR5 314 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 NUAK2Q9H093 628 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 CDH9Q9ULB4 789 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 FAM50BQ9Y247 325 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 MYH3P11055 1940 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 VPS26AO75436 327 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 PNPLA4P41247 253 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 EPS8Q12929 822 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 KCNJ11Q14654 390 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 REP15Q6BDI9 236 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 CLEC6AQ6EIG7 209 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 CENPNQ96H22 339 aaPredicted RBP16.33■□□□□ 0.2
SREBF1-201ENST00000261646 SPATA17Q96L03 361 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 APOL4Q9BPW4 351 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 DPY30Q9C005 99 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 U3KQV3 271 aa16.33■□□□□ 0.2
SREBF1-201ENST00000261646 ASB14A6NK59 587 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 LZTS3O60299 673 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-201ENST00000261646 LINC00032P0C843 101 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 CA9Q16790 459 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 DDR2Q16832 855 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 NCCRP1Q6ZVX7 275 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-201ENST00000261646 UBASH3BQ8TF42 649 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 ELMO1Q92556 727 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 WNT8BQ93098 351 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 FARP1Q9Y4F1 1045 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-201ENST00000261646 PNMA8CA0A1B0GUJ8 204 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 PCSK1P29120 753 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 RPL26P61254 145 aaKnown RBP16.32■□□□□ 0.2
SREBF1-201ENST00000261646 CLYBLQ8N0X4 340 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 MARVELD2Q8N4S9 558 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.32■□□□□ 0.22e-6■■■■■ 27.5
SREBF1-201ENST00000261646 WWOXQ9NZC7 414 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 NUDT5Q9UKK9 219 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 TIMM13Q9Y5L4 95 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-201ENST00000261646 EI24O14681 340 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 MFSD11O43934 449 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 GCATO75600 419 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 SORBS2O94875 1100 aaKnown RBP16.32■□□□□ 0.2
SREBF1-201ENST00000261646 CST1P01037 141 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 MYL3P08590 195 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 INSRRP14616 1297 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 ALDH4A1P30038 563 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 SLC7A1P30825 629 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 RGS4P49798 205 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 IRF9Q00978 393 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 MERTKQ12866 999 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 MBLAC2Q68D91 279 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 AKAP14Q86UN6 197 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 ADHFE1Q8IWW8 467 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 AMER2Q8N7J2 671 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 ZNF540Q8NDQ6 660 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 FNDC8Q8TC99 324 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 SLC39A3Q9BRY0 314 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 ENTPD7Q9NQZ7 604 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 LEF1Q9UJU2 399 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-201ENST00000261646 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-201ENST00000261646 PLIN4Q96Q06 1357 aa16.32■□□□□ 0.2
SREBF1-201ENST00000261646 SF3B1O75533 1304 aaKnown RBP eCLIP16.32■□□□□ 0.22e-6■■■■■ 87.3
SREBF1-201ENST00000261646 E7ENX8 843 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 STX7O15400 261 aaKnown RBP16.31■□□□□ 0.2
SREBF1-201ENST00000261646 NOS2P35228 1153 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 ZYG11AQ6WRX3 759 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 PIGZQ86VD9 579 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 SPATA2LQ8IUW3 424 aaPredicted RBP16.31■□□□□ 0.2
SREBF1-201ENST00000261646 MCFD2Q8NI22 146 aa16.31■□□□□ 0.2
SREBF1-201ENST00000261646 HOPXQ9BPY8 73 aaPredicted RBP16.31■□□□□ 0.2
SREBF1-201ENST00000261646 NTPCRQ9BSD7 190 aaKnown RBP16.31■□□□□ 0.2
SREBF1-201ENST00000261646 OR12D3Q9UGF7 316 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms