RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 CYGBQ8WWM9 190 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TRIM63Q969Q1 353 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 RERGQ96A58 199 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MRPS26Q9BYN8 205 aaKnown RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SENP6Q9GZR1 1112 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 OSBPL2Q9H1P3 480 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 DNAJC28Q9NX36 388 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CRNNQ9UBG3 495 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SIPA1L3O60292 1781 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 A0A1B0GVM2 712 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TCAF2A6NFQ2 919 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ATG13O75143 517 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ULK1O75385 1050 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 POP4O95707 220 aaKnown RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PLK1P53350 603 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ACOX1Q15067 660 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 FAM182BQ5T319 152 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 FBXL19Q6PCT2 694 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TBC1D21Q8IYX1 336 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 LRIG1Q96JA1 1093 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 BBS4Q96RK4 519 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ADAM2Q99965 735 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 SPAG4Q9NPE6 437 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 WBP11Q9Y2W2 641 aaKnown RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 AIM2O14862 343 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 HDAC3O15379 428 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ZNF286BP0CG31 522 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MZF1P28698 734 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 NOMO3P69849 1222 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ZNF33BQ06732 778 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 CHSY3Q70JA7 882 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 BEND5Q7L4P6 421 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MILR1Q7Z6M3 343 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TMEM126BQ8IUX1 230 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 BAP1Q92560 729 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MYO19Q96H55 970 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PSKH2Q96QS6 385 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 RTKNQ9BST9 563 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 DDX4Q9NQI0 724 aaKnown RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PRR23D1E9PI22 279 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MED26O95402 600 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 APODP05090 189 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 FAM58BPP0C7Q3 252 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 PRR23D2P0DMB1 279 aaPredicted RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 FLT3P36888 993 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MAGEA11P43364 429 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 JAM2P57087 298 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 RIPK1Q13546 671 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 C7orf26Q96N11 449 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 AIF1LQ9BQI0 150 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 YIPF3Q9GZM5 350 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TKTL2Q9H0I9 626 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 HEY2Q9UBP5 337 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 TAF6LQ9Y6J9 622 aa4.35□□□□□ -1.71
VPS13C-202ENST00000261517 MYO18AQ92614 2054 aaKnown RBP4.35□□□□□ -1.71
VPS13C-202ENST00000261517 ANKDD1BA6NHY2 528 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 CILPO75339 1184 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 PBX1P40424 430 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 RAP1GAPP47736 663 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 SCTRP47872 440 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 RAB30Q15771 203 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 KCNT1Q5JUK3 1230 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 SPRYD7Q5W111 196 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 DUPD1Q68J44 220 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 IRGCQ6NXR0 463 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 SPOCK2Q92563 424 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 ZC4H2Q9NQZ6 224 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 IARS2Q9NSE4 1012 aaKnown RBP4.34□□□□□ -1.71
VPS13C-202ENST00000261517 FNDC3AQ9Y2H6 1198 aaKnown RBP4.34□□□□□ -1.71
VPS13C-202ENST00000261517 CITO14578 2027 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 CNTNAP1P78357 1384 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 C2CD2LO14523 706 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 ZSCAN9O15535 394 aaPredicted RBP4.34□□□□□ -1.71
VPS13C-202ENST00000261517 TJAP1Q5JTD0 557 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 SLC25A41Q8N5S1 370 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 SNIP1Q8TAD8 396 aaKnown RBP4.34□□□□□ -1.71
VPS13C-202ENST00000261517 ARHGAP39Q9C0H5 1083 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 VRTNQ9H8Y1 702 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 CCDC177Q9NQR7 707 aaPredicted RBP4.34□□□□□ -1.71
VPS13C-202ENST00000261517 PAPOLBQ9NRJ5 636 aaKnown RBP4.34□□□□□ -1.71
VPS13C-202ENST00000261517 GDAP2Q9NXN4 497 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 TTLL8A6PVC2 850 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 CBX4O00257 560 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 ZNF185O15231 689 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 EPOP01588 193 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 PRPS2P11908 318 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 IMPDH2P12268 514 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 IL12AP29459 219 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 SOAT1P35610 550 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 IL10RBQ08334 325 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 N4BP2L1Q5TBK1 243 aaPredicted RBP4.34□□□□□ -1.71
VPS13C-202ENST00000261517 CDCA2Q69YH5 1023 aaPredicted RBP4.34□□□□□ -1.71
VPS13C-202ENST00000261517 FAM35AQ86V20 835 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 SNX32Q86XE0 403 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 DNAAF5Q86Y56 855 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 DDHD1Q8NEL9 900 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 RHOBTB2Q9BYZ6 727 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 PLEKHA4Q9H4M7 779 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 EXD2Q9NVH0 621 aa4.34□□□□□ -1.71
VPS13C-202ENST00000261517 IGSF9Q9P2J2 1179 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms