RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 MEIS3P2A8K0S8 358 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 PIRO00625 290 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 TREHO43280 583 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 TADA2AO75478 443 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 HNRNPCP07910 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 GFAPP14136 432 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 HADHAP40939 763 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 NR1H2P55055 460 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 TTC33Q6PID6 262 aaPredicted RBP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 TAC4Q86UU9 113 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 DHFR2Q86XF0 187 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 STYXQ8WUJ0 223 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 PRICKLE1Q96MT3 831 aaPredicted RBP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 VTA1Q9NP79 307 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 GMPR2Q9P2T1 348 aaKnown RBP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 SHROOM3Q8TF72 1996 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 NRCAMQ92823 1304 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 ANGPT2O15123 496 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 B3GAT3O94766 335 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 MT-ND1P03886 318 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 ASLP04424 464 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 GABRB3P28472 473 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 BEX3Q00994 111 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 TRIM25Q14258 630 aaKnown RBP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 TBCELQ5QJ74 424 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 MARCH8Q5T0T0 291 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 CLVS1Q8IUQ0 354 aaPredicted RBP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 CNTD1Q8N815 330 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 RDH11Q8TC12 318 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 PTTG2Q9NZH5 202 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 HEMK1Q9Y5R4 338 aaPredicted RBP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 RRN3P2A6NIE6 340 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 BCAS2O75934 225 aaPredicted RBP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 F9P00740 461 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 SNRPB2P08579 225 aaKnown RBP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 CAPRIN1Q14444 709 aaKnown RBP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 SNX17Q15036 470 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 OTUD1Q5VV17 481 aaPredicted RBP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 REP15Q6BDI9 236 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 METTL25Q8N6Q8 603 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 TUBGCP3Q96CW5 907 aa16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 MRPL57Q9BQC6 102 aaKnown RBP16.32■□□□□ 0.2
SNCAIP-202ENST00000261368 DNAJC25-GNG10A0A024R161 153 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 SDHDO14521 159 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 SMIM18P0DKX4 95 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 UGT1A6P19224 532 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 MGAT5BQ3V5L5 792 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 GABPB2Q8TAK5 448 aaPredicted RBP16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 TMIGD2Q96BF3 282 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 KLHL5Q96PQ7 755 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 SMOQ99835 787 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 SPAG4Q9NPE6 437 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 CRTAC1Q9NQ79 661 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 RIMS3Q9UJD0 308 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 MYRFQ9Y2G1 1151 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 ZNF711Q9Y462 761 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 M0QZ92 97 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 PDLIM1O00151 329 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 GIPC1O14908 333 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 HMBSP08397 361 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 PIRTP0C851 137 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 GEMP55040 296 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 IFNLR1Q8IU57 520 aaPredicted RBP16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 EGFL6Q8IUX8 553 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 GPC2Q8N158 579 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 ARRDC4Q8NCT1 418 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 GRIN3AQ8TCU5 1115 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 VAT1Q99536 393 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 MRPL40Q9NQ50 206 aaKnown RBP16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 DMTF1Q9Y222 760 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 TCAF2A6NFQ2 919 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 NCF1BA6NI72 391 aaPredicted RBP16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 NCF1CA8MVU1 366 aaPredicted RBP16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 I6L893 689 aaPredicted RBP16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 NCF1P14598 390 aaPredicted RBP16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 NSUN2Q08J23 767 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 ZNF789Q5FWF6 425 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 LCA5Q86VQ0 697 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 KDM1BQ8NB78 822 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 GLOD4Q9HC38 313 aa16.31■□□□□ 0.2
SNCAIP-202ENST00000261368 OR51F1A6NGY5 319 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 TRMUO75648 421 aaKnown RBP16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 POMCP01189 267 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 TMEM259Q4ZIN3 620 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 CLEC14AQ86T13 490 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 LSMEM2Q8N112 164 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 SCAMP5Q8TAC9 235 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 ZNF512Q96ME7 567 aaPredicted RBP16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 BTRCQ9Y297 605 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 KCNA5P22460 613 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 SCNN1AP37088 669 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 GRIK1P39086 918 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 ADARP55265 1226 aaKnown RBP16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 TPD52P55327 224 aaPredicted RBP16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 GPR158Q5T848 1215 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 BLOC1S5Q8TDH9 187 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 MAF1Q9H063 256 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 RNF181Q9P0P0 153 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 VILLO15195 856 aa16.3■□□□□ 0.2
SNCAIP-202ENST00000261368 PSMD3O43242 534 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms