RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 SLC7A4O43246 635 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 ITPKAP23677 461 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 CTNNA2P26232 953 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 NSUN2Q08J23 767 aaKnown RBP eCLIP16.98■□□□□ 0.31
SDCBP-201ENST00000260130 TFDP2Q14188 446 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 TFDP3Q5H9I0 405 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 SYCP2LQ5T4T6 812 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 PEX26Q7Z412 305 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 CCDC50Q8IVM0 306 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 OR14C36Q8NHC7 312 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 FAM76AQ8TAV0 307 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 VOPP1Q96AW1 172 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 PSKH2Q96QS6 385 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 LRRC1Q9BTT6 524 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 PIEZO1Q92508 2521 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 SDK1Q7Z5N4 2213 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 LRRC72A6NJI9 287 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 LRP3O75074 770 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 KRT10P13645 584 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 CCNCP24863 283 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 MPLP40238 635 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 CSNK1DP48730 415 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 PEX5P50542 639 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 ADPRHP54922 357 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 SPEM2Q0P670 501 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 GLE1Q53GS7 698 aaKnown RBP16.97■□□□□ 0.31
SDCBP-201ENST00000260130 AGBL4Q5VU57 503 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 OR2T34Q8NGX1 318 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 PIGKQ92643 395 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 TSGA13Q96PP4 275 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 OSBPL1AQ9BXW6 950 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 HDAC8Q9BY41 377 aa16.97■□□□□ 0.31
SDCBP-201ENST00000260130 NYNRINQ9P2P1 1898 aaKnown RBP16.97■□□□□ 0.31
SDCBP-201ENST00000260130 RIF1Q5UIP0 2472 aaKnown RBP16.97■□□□□ 0.31
SDCBP-201ENST00000260130 INSIG1O15503 277 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 ITGB7P26010 798 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 TNFRSF8P28908 595 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 DPP6P42658 865 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 RENBPP51606 427 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 RWDD2BP57060 319 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 DYNLT1P63172 113 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 LLGL1Q15334 1064 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 WDR45BQ5MNZ6 344 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 MARC1Q5VT66 337 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 DCAF12L1Q5VU92 463 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 KAZNQ674X7 775 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 TIGD7Q6NT04 549 aaPredicted RBP16.96■□□□□ 0.31
SDCBP-201ENST00000260130 EMBQ6PCB8 327 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 NCEH1Q6PIU2 408 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 GDPD4Q6W3E5 623 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 ERN2Q76MJ5 926 aaKnown RBP16.96■□□□□ 0.31
SDCBP-201ENST00000260130 SYT12Q8IV01 421 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 BBS5Q8N3I7 341 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 CPEB1Q9BZB8 566 aaKnown RBP16.96■□□□□ 0.31
SDCBP-201ENST00000260130 KDM4CQ9H3R0 1056 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 PILRBQ9UKJ0 227 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 EP300Q09472 2414 aaPredicted RBP16.96■□□□□ 0.31
SDCBP-201ENST00000260130 SPAG17Q6Q759 2223 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 hCG_1818297A0A087WSY0 165 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 GOLGA6CA6NDK9 693 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 MEI4A8MW99 385 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 AGPSO00116 658 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 MATN3O15232 486 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 PLRG1O43660 514 aaKnown RBP16.96■□□□□ 0.31
SDCBP-201ENST00000260130 OPA1O60313 960 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 CST8O60676 142 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 UGT2B4P06133 528 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 GOLGA6DP0CG33 693 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 RGRP47804 291 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 COPS2P61201 443 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 HNRNPDQ14103 355 aaKnown RBP16.96■□□□□ 0.31
SDCBP-201ENST00000260130 ZNF235Q14590 738 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 GRM3Q14832 879 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 ZNF805Q5CZA5 627 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 PLA2G2CQ5R387 149 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 PIP5KL1Q5T9C9 394 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 RGL4Q8IZJ4 473 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 CCNYQ8ND76 341 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 HDAC11Q96DB2 347 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 TMEM74BQ9NUR3 256 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 GOLGA6AQ9NYA3 693 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 THADAQ6YHU6 1953 aa16.96■□□□□ 0.31
SDCBP-201ENST00000260130 TBC1D3DA0A087WVF3 549 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 TBC1D3IA0A087WXS9 549 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 TBC1D3EA0A087X179 549 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 TBC1D3KA0A087X1G2 549 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 TBC1D3FA6NER0 549 aaPredicted RBP16.95■□□□□ 0.3
SDCBP-201ENST00000260130 MIF4GDA9UHW6 222 aaKnown RBP16.95■□□□□ 0.3
SDCBP-201ENST00000260130 TBC1D3LB9A6J9 549 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 GOLGA8KD6RF30 607 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 MUSKO15146 869 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 FTCDO95954 541 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 TBC1D3HP0C7X1 549 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 TGM1P22735 817 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
SDCBP-201ENST00000260130 HSPA9P38646 679 aaKnown RBP16.95■□□□□ 0.3
SDCBP-201ENST00000260130 CCDC6Q16204 474 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 PPP2R5EQ16537 467 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 TBC1D3GQ6DHY5 549 aa16.95■□□□□ 0.3
SDCBP-201ENST00000260130 TBC1D3CQ6IPX1 549 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms