RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 LPGAT1Q92604 370 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 EMID1Q96A84 441 aaPredicted RBP17.12■□□□□ 0.33
CDK4-201ENST00000257904 SGF29Q96ES7 293 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 DUS3LQ96G46 650 aaKnown RBP17.12■□□□□ 0.33
CDK4-201ENST00000257904 UHRF1Q96T88 793 aaPredicted RBP17.12■□□□□ 0.33
CDK4-201ENST00000257904 FTHL17Q9BXU8 183 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 SPAG4Q9NPE6 437 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 IPO11Q9UI26 975 aaKnown RBP17.12■□□□□ 0.33
CDK4-201ENST00000257904 A0A0J9YVX5 310 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 PRORSD1PA6NEY8 169 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 H3BNH8 94 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 CACNG3O60359 315 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 ATP5F1P24539 256 aaPredicted RBP17.12■□□□□ 0.33
CDK4-201ENST00000257904 SLC7A1P30825 629 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 ARCN1P48444 511 aaKnown RBP17.12■□□□□ 0.33
CDK4-201ENST00000257904 EMP3P54852 163 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 DAOAP59103 153 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 FASTKQ14296 549 aaKnown RBP17.12■□□□□ 0.33
CDK4-201ENST00000257904 ARL13BQ3SXY8 428 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 CST9Q5W186 159 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 HERC6Q8IVU3 1022 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDK4-201ENST00000257904 HEXDCQ8WVB3 486 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 PGAP3Q96FM1 320 aaPredicted RBP17.12■□□□□ 0.33
CDK4-201ENST00000257904 FAR2Q96K12 515 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 ZNF512Q96ME7 567 aaPredicted RBP17.12■□□□□ 0.33
CDK4-201ENST00000257904 TMEM79Q9BSE2 394 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 MEAF6Q9HAF1 191 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 CDHR5Q9HBB8 845 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 NMRK2Q9NPI5 230 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 DDIT4Q9NX09 232 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 MYRFQ9Y2G1 1151 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 FIS1Q9Y3D6 152 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 SNX13Q9Y5W8 968 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 SNX10Q9Y5X0 201 aa17.12■□□□□ 0.33
CDK4-201ENST00000257904 PDCD11Q14690 1871 aaKnown RBP17.12■□□□□ 0.33
CDK4-201ENST00000257904 A0A087X1B8 175 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 PSMD12O00232 456 aaPredicted RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 CCDC166P0CW27 439 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 ARSAP15289 507 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 ARNTP27540 789 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 CDK9P50750 372 aaKnown RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 TAS2R39P59534 338 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 LILRA4P59901 499 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 POU6F1Q14863 301 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 ERI1Q8IV48 349 aaKnown RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 MYO1HQ8N1T3 1032 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 TOP6BLQ8N6T0 577 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 SPATA22Q8NHS9 363 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 RIN3Q8TB24 985 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 MAML3Q96JK9 1138 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 SLC29A1Q99808 456 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 TBL1YQ9BQ87 522 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 MED10Q9BTT4 135 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 FAM49AQ9H0Q0 323 aaPredicted RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 VTA1Q9NP79 307 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 PNPLA3Q9NST1 481 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 CD300AQ9UGN4 299 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 AAR2Q9Y312 384 aaKnown RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 SQORQ9Y6N5 450 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 SHROOM3Q8TF72 1996 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 NEMP2A6NFY4 417 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 UBDO15205 165 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 XPOTO43592 962 aaKnown RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 GPR32O75388 356 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 NCAM1P13591 858 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 KCNE1P15382 129 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 HDCP19113 662 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 ADCYAP1R1P41586 468 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 SLC1A2P43004 574 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 KPNA2P52292 529 aaKnown RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 RABGGTBP53611 331 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 C1QTNF8P60827 252 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 PSMD5Q16401 504 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 AGKQ53H12 422 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 KRT80Q6KB66 452 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 HMBOX1Q6NT76 420 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 ESRP1Q6NXG1 681 aaKnown RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 DPP9Q86TI2 863 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 USP33Q8TEY7 942 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 TMIGD2Q96BF3 282 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 CELF6Q96J87 481 aaKnown RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 ELMO2Q96JJ3 720 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 OSMRQ99650 979 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 CIB1Q99828 191 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 PTPN18Q99952 460 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 COLEC11Q9BWP8 271 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 CAAP1Q9H8G2 361 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 OLAHQ9NV23 265 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 OR12D3Q9UGF7 316 aa17.11■□□□□ 0.33
CDK4-201ENST00000257904 CNOT6Q9ULM6 557 aaKnown RBP17.11■□□□□ 0.33
CDK4-201ENST00000257904 hCG_2014768A0A024R1R8 64 aa17.1■□□□□ 0.33
CDK4-201ENST00000257904 PFDN1O60925 122 aa17.1■□□□□ 0.33
CDK4-201ENST00000257904 LRIG2O94898 1065 aa17.1■□□□□ 0.33
CDK4-201ENST00000257904 NELFEP18615 380 aaKnown RBP17.1■□□□□ 0.33
CDK4-201ENST00000257904 TUBA4AP68366 448 aa17.1■□□□□ 0.33
CDK4-201ENST00000257904 C6orf10Q5SRN2 563 aa17.1■□□□□ 0.33
CDK4-201ENST00000257904 AFAP1L2Q8N4X5 818 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms