RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 NDNQ99608 321 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 OMDQ99983 421 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 SLC25A51Q9H1U9 297 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 TMEM248Q9NWD8 314 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 ANKRD6Q9Y2G4 727 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 CDY1Q9Y6F8 540 aa18.89■□□□□ 0.61
PDLIM4-201ENST00000253754 GOLGA8QA0A0J9YX86 632 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 GOLGA8OA6NCC3 632 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 TMEM114B3SHH9 223 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 GOLGA8NF8WBI6 632 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 ZBTB14O43829 449 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 ZMPSTE24O75844 475 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 TM7SF2O76062 418 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 PSMG1O95456 288 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 TIMP1P01033 207 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 MMP2P08253 660 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 SLC2A3P11169 496 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 HADHAP40939 763 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 ALDH7A1P49419 539 aaKnown RBP18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 NAGLUP54802 743 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 TAS2R39P59534 338 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 RAB10P61026 200 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 RBM20Q5T481 1227 aaKnown RBP18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 LRRC8EQ6NSJ5 796 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 CNSTQ6PJW8 725 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 EPGNQ6UW88 154 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 RNF19BQ6ZMZ0 732 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 TMEM175Q9BSA9 504 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 SP110Q9HB58 689 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 MARCH2Q9P0N8 246 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 SLC7A8Q9UHI5 535 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 SORCS3Q9UPU3 1222 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 ACOT9Q9Y305 439 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 SLC12A8A0AV02 714 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 DCXO43602 365 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 RAG1P15918 1043 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 FGFR3P22607 806 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 RFC2P35250 354 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 RENBPP51606 427 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 NDST2P52849 883 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 HNRNPDQ14103 355 aaKnown RBP18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 TAF11Q15544 211 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 UGP2Q16851 508 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 RALGPS1Q5JS13 557 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 MARC1Q5VT66 337 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 LIPMQ5VYY2 423 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 TAS1R1Q7RTX1 841 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 ARHGAP24Q8N264 748 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 ARHGAP18Q8N392 663 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 PGBD5Q8N414 524 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 C2CD4AQ8NCU7 369 aaPredicted RBP18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 BCL7CQ8WUZ0 217 aaPredicted RBP18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 SGF29Q96ES7 293 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 TSNARE1Q96NA8 513 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 GPR78Q96P69 363 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 PANX3Q96QZ0 392 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 OSBPL1AQ9BXW6 950 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 WDR55Q9H6Y2 383 aaPredicted RBP18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 CCSER2Q9H7U1 834 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 FBXO5Q9UKT4 447 aa18.88■□□□□ 0.61
PDLIM4-201ENST00000253754 CEP290O15078 2479 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 PLXNA3P51805 1871 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 LOC100653049A0A140TA62 436 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 MTMR11A4FU01 709 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 NEMP1O14524 444 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 TBX10O75333 385 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 KRT34O76011 436 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 KLHL2O95198 593 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 LMNAP02545 664 aaKnown RBP18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 STMN1P16949 149 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 MAGEA11P43364 429 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 MRPL58Q14197 206 aaKnown RBP18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 ARL13AQ5H913 290 aaPredicted RBP18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 RTP2Q5QGT7 225 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 KIAA0930Q6ICG6 404 aaPredicted RBP18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 NEPROQ6NW34 567 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 RIPOR1Q6ZS17 1223 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 CCDC117Q8IWD4 279 aaPredicted RBP18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 GIPC2Q8TF65 315 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 STYXQ8WUJ0 223 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 NRG4Q8WWG1 115 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 BTN2A3PQ96KV6 586 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 RPRD1AQ96P16 312 aaPredicted RBP18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 MRM3Q9HC36 420 aaKnown RBP18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 IL37Q9NZH6 218 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 WASF2Q9Y6W5 498 aa18.87■□□□□ 0.61
PDLIM4-201ENST00000253754 TARM1B6A8C7 271 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 DLX3O60479 287 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 ACVRL1P37023 503 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 CD151P48509 253 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 TRIP4Q15650 581 aaPredicted RBP18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 CCDC6Q16204 474 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 DNAL1Q4LDG9 190 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 LRRC49Q8IUZ0 686 aa18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 PTCD2Q8WV60 388 aaKnown RBP18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 SREK1Q8WXA9 508 aaKnown RBP18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 UBE2OQ9C0C9 1292 aaKnown RBP18.86■□□□□ 0.61
PDLIM4-201ENST00000253754 ZNF212Q9UDV6 495 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms