RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 FBXO46Q6PJ61 603 aaPredicted RBP17.17■□□□□ 0.34
FOXA1-201ENST00000250448 STRADAQ7RTN6 431 aa17.17■□□□□ 0.34
FOXA1-201ENST00000250448 SETD3Q86TU7 594 aaPredicted RBP17.17■□□□□ 0.34
FOXA1-201ENST00000250448 CCNYQ8ND76 341 aa17.17■□□□□ 0.34
FOXA1-201ENST00000250448 ADCY4Q8NFM4 1077 aa17.17■□□□□ 0.34
FOXA1-201ENST00000250448 RCN3Q96D15 328 aa17.17■□□□□ 0.34
FOXA1-201ENST00000250448 CNBD2Q96M20 576 aa17.17■□□□□ 0.34
FOXA1-201ENST00000250448 AGAP2Q99490 1192 aa17.17■□□□□ 0.34
FOXA1-201ENST00000250448 NMRAL1Q9HBL8 299 aa17.17■□□□□ 0.34
FOXA1-201ENST00000250448 DSEQ9UL01 958 aa17.17■□□□□ 0.34
FOXA1-201ENST00000250448 TBX21Q9UL17 535 aa17.17■□□□□ 0.34
FOXA1-201ENST00000250448 VWA8A3KMH1 1905 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 SRGAP2BP0DMP2 458 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 SULT1E1P49888 294 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 MYBPC1Q00872 1141 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 TSPY1Q01534 308 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 CYLC2Q14093 348 aaPredicted RBP17.16■□□□□ 0.34
FOXA1-201ENST00000250448 LSM12Q3MHD2 195 aaKnown RBP17.16■□□□□ 0.34
FOXA1-201ENST00000250448 KLHDC10Q6PID8 442 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 TAS1R1Q7RTX1 841 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 BCL7CQ8WUZ0 217 aaPredicted RBP17.16■□□□□ 0.34
FOXA1-201ENST00000250448 PPP1R36Q96LQ0 422 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 SEZ6LQ9BYH1 1024 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 GRIP2Q9C0E4 1043 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 COPS7BQ9H9Q2 264 aaPredicted RBP17.16■□□□□ 0.34
FOXA1-201ENST00000250448 MARCH5Q9NX47 278 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 MID2Q9UJV3 735 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 RAP2CQ9Y3L5 183 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 HDAC3O15379 428 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 TMCC1O94876 653 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 C2P06681 752 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 PKNOX1P55347 436 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 NME3Q13232 169 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 SEL1L3Q68CR1 1132 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 NPAS4Q8IUM7 802 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 SCN4BQ8IWT1 228 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 CRIPAKQ8N1N5 446 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 TTC9BQ8N6N2 239 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 RNF139Q8WU17 664 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 RBM38Q9H0Z9 239 aaKnown RBP17.16■□□□□ 0.34
FOXA1-201ENST00000250448 PRDM12Q9H4Q4 367 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 ELAC1Q9H777 363 aaKnown RBP17.16■□□□□ 0.34
FOXA1-201ENST00000250448 OXSMQ9NWU1 459 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 APPL1Q9UKG1 709 aa17.16■□□□□ 0.34
FOXA1-201ENST00000250448 CCDC160A6NGH7 325 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 SLC22A2O15244 555 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 FYNP06241 537 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 PYGLP06737 847 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 PPARGP37231 505 aaPredicted RBP17.15■□□□□ 0.34
FOXA1-201ENST00000250448 GPR15P49685 360 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 TMEM259Q4ZIN3 620 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 VARS2Q5ST30 1063 aaKnown RBP17.15■□□□□ 0.34
FOXA1-201ENST00000250448 PGAM4Q8N0Y7 254 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 LILRA2Q8N149 483 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 BHLHE22Q8NFJ8 381 aaPredicted RBP17.15■□□□□ 0.34
FOXA1-201ENST00000250448 GPR152Q8TDT2 470 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 KCTD13Q8WZ19 329 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 ZNF385DQ9H6B1 395 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 TANC1Q9C0D5 1861 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 SOAT2O75908 522 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 CXCL10P02778 98 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 AMHP03971 560 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 ALDH2P05091 517 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 ATP6V1B1P15313 513 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 EPHA3P29320 983 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 CEACAM7Q14002 265 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 OTUD1Q5VV17 481 aaPredicted RBP17.15■□□□□ 0.34
FOXA1-201ENST00000250448 SPATA2LQ8IUW3 424 aaPredicted RBP17.15■□□□□ 0.34
FOXA1-201ENST00000250448 CPSF7Q8N684 471 aaKnown RBP17.15■□□□□ 0.34
FOXA1-201ENST00000250448 SLC7A14Q8TBB6 771 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 VANGL2Q9ULK5 521 aa17.15■□□□□ 0.34
FOXA1-201ENST00000250448 CFLARO15519 480 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 USP12O75317 370 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 ENO3P13929 434 aaPredicted RBP17.14■□□□□ 0.34
FOXA1-201ENST00000250448 TYMPP19971 482 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 GRIK1P39086 918 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 MATKP42679 507 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 PGFP49763 221 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 RPL14P50914 215 aaKnown RBP17.14■□□□□ 0.34
FOXA1-201ENST00000250448 DAOAP59103 153 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 GK3PQ14409 553 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 PID1Q7Z2X4 250 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 DLG3Q92796 817 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 USP13Q92995 863 aaPredicted RBP17.14■□□□□ 0.34
FOXA1-201ENST00000250448 TOX2Q96NM4 488 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 DRC3Q9H069 523 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 ACSS2Q9NR19 701 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 KLHL8Q9P2G9 620 aaPredicted RBP17.14■□□□□ 0.34
FOXA1-201ENST00000250448 DMTF1Q9Y222 760 aa17.14■□□□□ 0.34
FOXA1-201ENST00000250448 ZCWPW2A0A1B0GU75 182 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 PRSS51A0A1B0GVH4 220 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 ACRP10323 421 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 CSF2RAP15509 400 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 MSX2P35548 267 aaPredicted RBP17.14■□□□□ 0.33
FOXA1-201ENST00000250448 GJA8P48165 433 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 HSPA13P48723 471 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 HK2P52789 917 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 MS4A2Q01362 244 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 APOFQ13790 326 aa17.14■□□□□ 0.33
FOXA1-201ENST00000250448 FRG1Q14331 258 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms