RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 PCID2Q5JVF3 399 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 SPANXN2Q5MJ10 180 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 C9orf57Q5W0N0 161 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 RD3Q7Z3Z2 195 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 RASGEF1CQ8N431 466 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 ATG16L2Q8NAA4 619 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 GRIN3AQ8TCU5 1115 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 APBB2Q92870 758 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 LENG9Q96B70 501 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 MTFMTQ96DP5 389 aaKnown RBP11.45□□□□□ -0.58
FAM78A-201ENST00000247295 SOX6P35712 828 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 SEPHS1P49903 392 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 RPL14P50914 215 aaKnown RBP11.45□□□□□ -0.58
FAM78A-201ENST00000247295 JAG1P78504 1218 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 CFAP52Q8N1V2 620 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 LRRC52Q8N7C0 313 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 TLCD1Q96CP7 247 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 NSMCE2Q96MF7 247 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 KCTD14Q9BQ13 255 aaPredicted RBP11.45□□□□□ -0.58
FAM78A-201ENST00000247295 EMILIN2Q9BXX0 1053 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 PLK2Q9NYY3 685 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 CACNG4Q9UBN1 327 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 FBXO5Q9UKT4 447 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 DGKBQ9Y6T7 804 aa11.45□□□□□ -0.58
FAM78A-201ENST00000247295 RP1L1Q8IWN7 2480 aaPredicted RBP11.44□□□□□ -0.58
FAM78A-201ENST00000247295 SOWAHBA6NEL2 793 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 LDLRP01130 860 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 KRT6AP02538 564 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 KRT6BP04259 564 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 DARSP14868 501 aaKnown RBP11.44□□□□□ -0.58
FAM78A-201ENST00000247295 KRT6CP48668 564 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 NECAB2Q7Z6G3 386 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 TRIM48Q8IWZ4 208 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 OR6K2Q8NGY2 324 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 SUN5Q8TC36 379 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 TRPC4APQ8TEL6 797 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 TMEM159Q96B96 161 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 SHISA4Q96DD7 197 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 GPATCH1Q9BRR8 931 aaKnown RBP11.44□□□□□ -0.58
FAM78A-201ENST00000247295 HGH1Q9BTY7 390 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 PTTG2Q9NZH5 202 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 ZNF214Q9UL59 606 aaPredicted RBP11.44□□□□□ -0.58
FAM78A-201ENST00000247295 ACTL7BQ9Y614 415 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 RAD54BQ9Y620 910 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 KIF1AQ12756 1690 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 CACNA1FO60840 1977 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 C5orf60A6NFR6 353 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 CENPXA8MT69 81 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 DDX5P17844 614 aaKnown RBP11.44□□□□□ -0.58
FAM78A-201ENST00000247295 HDCP19113 662 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 ARL4DP49703 201 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 JAM2P57087 298 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 PTPRNQ16849 979 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 ARMC12Q5T9G4 340 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 ERAP2Q6P179 960 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 MON1BQ7L1V2 547 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 XYLT1Q86Y38 959 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 PTGR2Q8N8N7 351 aaPredicted RBP11.44□□□□□ -0.58
FAM78A-201ENST00000247295 RPRD1BQ9NQG5 326 aaKnown RBP11.44□□□□□ -0.58
FAM78A-201ENST00000247295 VPS45Q9NRW7 570 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 TAS2R1Q9NYW7 299 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 XPR1Q9UBH6 696 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 GPC6Q9Y625 555 aaPredicted RBP11.44□□□□□ -0.58
FAM78A-201ENST00000247295 SNPHO15079 494 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 CILPO75339 1184 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 COX4I1P13073 169 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 ADRA1BP35368 520 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 GRIA4P48058 902 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 CRYBB1P53674 252 aaPredicted RBP11.44□□□□□ -0.58
FAM78A-201ENST00000247295 NOMO2Q5JPE7 1267 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 ANKRD22Q5VYY1 191 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 THOC7Q6I9Y2 204 aaKnown RBP11.44□□□□□ -0.58
FAM78A-201ENST00000247295 IL27RAQ6UWB1 636 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 C6orf89Q6UWU4 347 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 PYROXD2Q8N2H3 581 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 ZNF398Q8TD17 642 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 HDAC10Q969S8 669 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 CSPG4P5Q96PW8 444 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 DUSP16Q9BY84 665 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 POLG2Q9UHN1 485 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 NR2E3Q9Y5X4 410 aa11.44□□□□□ -0.58
FAM78A-201ENST00000247295 FFAR3O14843 346 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 GPR42O15529 346 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 TOMM70O94826 608 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 CYP1A1P04798 512 aaPredicted RBP11.43□□□□□ -0.58
FAM78A-201ENST00000247295 CHRNB2P17787 502 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 PAX3P23760 479 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 CHI3L1P36222 383 aaPredicted RBP11.43□□□□□ -0.58
FAM78A-201ENST00000247295 TRAF3Q13114 568 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 GALNT18Q6P9A2 607 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 LCLAT1Q6UWP7 414 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 PLEKHM3Q6ZWE6 761 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 GPSM1Q86YR5 675 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 PLD5Q8N7P1 536 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 PPTC7Q8NI37 304 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 SIX2Q9NPC8 291 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 DMAC2Q9NW81 257 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 UXTQ9UBK9 157 aaPredicted RBP11.43□□□□□ -0.58
FAM78A-201ENST00000247295 KLQ9UEF7 1012 aa11.43□□□□□ -0.58
FAM78A-201ENST00000247295 LIMD1Q9UGP4 676 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms