RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 SLC39A11Q8N1S5 342 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 RBM15BQ8NDT2 890 aaKnown RBP12.84□□□□□ -0.35
SNAI1-201ENST00000244050 ATXN7L3BQ96GX2 97 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 ZNF419Q96HQ0 510 aaPredicted RBP12.84□□□□□ -0.35
SNAI1-201ENST00000244050 C1QTNF1Q9BXJ1 281 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 CAB39LQ9H9S4 337 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 PNPOQ9NVS9 261 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 RBM22Q9NW64 420 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNAI1-201ENST00000244050 COMMD8Q9NX08 183 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 SLC4A7Q9Y6M7 1214 aa12.84□□□□□ -0.35
SNAI1-201ENST00000244050 CARNS1A5YM72 827 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 SLC38A8A6NNN8 435 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 ZBBXA8MT70 800 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 F8W8V4 182 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 MOCS2O96007 188 aaPredicted RBP12.83□□□□□ -0.35
SNAI1-201ENST00000244050 HLA-DQB2P05538 268 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 ATF6P18850 670 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 ELF1P32519 619 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 GMPRP36959 345 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 TUFMP49411 452 aaKnown RBP12.83□□□□□ -0.35
SNAI1-201ENST00000244050 PAPOLAP51003 745 aaKnown RBP12.83□□□□□ -0.35
SNAI1-201ENST00000244050 IRF9Q00978 393 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 DSG1Q02413 1049 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 KPNB1Q14974 876 aaKnown RBP12.83□□□□□ -0.35
SNAI1-201ENST00000244050 DLG2Q15700 870 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 ACSBG2Q5FVE4 666 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 RANBP10Q6VN20 620 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 C14orf80Q86SX3 495 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 ZNF683Q8IZ20 524 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 UMODL1-AS1Q8N2C9 162 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 PPHLN1Q8NEY8 458 aaKnown RBP12.83□□□□□ -0.35
SNAI1-201ENST00000244050 IPMKQ8NFU5 416 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 FICDQ9BVA6 458 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 HERC2P3Q9BVR0 1158 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 ARNT2Q9HBZ2 717 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 OLA1Q9NTK5 396 aaKnown RBP12.83□□□□□ -0.35
SNAI1-201ENST00000244050 NDFIP2Q9NV92 336 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 OXSMQ9NWU1 459 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 DONSONQ9NYP3 566 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 SPG21Q9NZD8 308 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 TLK1Q9UKI8 766 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 SLC39A10Q9ULF5 831 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 MAGED2Q9UNF1 606 aaPredicted RBP12.83□□□□□ -0.35
SNAI1-201ENST00000244050 TCAF1Q9Y4C2 921 aa12.83□□□□□ -0.35
SNAI1-201ENST00000244050 TM7SF2O76062 418 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 AHSGP02765 367 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 URODP06132 367 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 GABRB3P28472 473 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 CPA2P48052 419 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 HK2P52789 917 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 NDST2P52849 883 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 KDSRQ06136 332 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 EFEMP1Q12805 493 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 SLC12A1Q13621 1099 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 UBAP2LQ14157 1087 aaKnown RBP12.83□□□□□ -0.36
SNAI1-201ENST00000244050 CMPK2Q5EBM0 449 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 ZYG11AQ6WRX3 759 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 TMEM151AQ8N4L1 468 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 MAB21L3Q8N8X9 362 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 ACVR1CQ8NER5 493 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 ADAMTS19Q8TE59 1207 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 MRGPRX2Q96LB1 330 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 CLSTN3Q9BQT9 956 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 CDH19Q9H159 772 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 SLC25A51Q9H1U9 297 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 TREX1Q9NSU2 369 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.83□□□□□ -0.36
SNAI1-201ENST00000244050 CLIC5Q9NZA1 410 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 STOML1Q9UBI4 398 aa12.83□□□□□ -0.36
SNAI1-201ENST00000244050 IPO11Q9UI26 975 aaKnown RBP12.83□□□□□ -0.36
SNAI1-201ENST00000244050 BDP1A6H8Y1 2624 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 E2F8A0AVK6 867 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 ARHGEF15O94989 841 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 PEX11BO96011 259 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 RPSAP08865 295 aaKnown RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 RHOQP17081 205 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 PAMP19021 973 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 ARNTP27540 789 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 ABCG1P45844 678 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 TBX4P57082 545 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 HNRNPDQ14103 355 aaKnown RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 RCN2Q14257 317 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 USP10Q14694 798 aaKnown RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 POU6F1Q14863 301 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 C10orf120Q5SQS8 335 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 PIK3R6Q5UE93 754 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 METTL21CQ5VZV1 264 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 PPP2R2DQ66LE6 453 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 KIAA0930Q6ICG6 404 aaPredicted RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 ESRP1Q6NXG1 681 aaKnown RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 EPGNQ6UW88 154 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 NAPRTQ6XQN6 538 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 NET1Q7Z628 596 aaPredicted RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 DDX53Q86TM3 631 aaKnown RBP12.82□□□□□ -0.36
SNAI1-201ENST00000244050 MIB1Q86YT6 1006 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 SCUBE1Q8IWY4 988 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 FBXO27Q8NI29 283 aa12.82□□□□□ -0.36
SNAI1-201ENST00000244050 ZNF461Q8TAF7 563 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms