RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CYP4F2P78329 520 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 SRSF1Q07955 248 aaKnown RBP eCLIP14.02□□□□□ -0.161e-6■■□□□ 12.1
DDX39A-201ENST00000242776 ARHGAP44Q17R89 818 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 ATG14Q6ZNE5 492 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 RAB11FIP2Q7L804 512 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 VPS36Q86VN1 386 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 LURAP1LQ8IV03 231 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 STK32AQ8WU08 396 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 KLF6Q99612 283 aaPredicted RBP14.02□□□□□ -0.16
DDX39A-201ENST00000242776 LRRC61Q9BV99 259 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 BOCQ9BWV1 1114 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 PISDQ9UG56 409 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 RABGEF1Q9UJ41 708 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 FHOD1Q9Y613 1164 aa14.02□□□□□ -0.16
DDX39A-201ENST00000242776 UNC13CQ8NB66 2214 aa14.02□□□□□ -0.17
DDX39A-201ENST00000242776 ZFC3H1O60293 1989 aaKnown RBP14.02□□□□□ -0.17
DDX39A-201ENST00000242776 PLD2O14939 933 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 YY2O15391 372 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 HSF2BPO75031 334 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 SRGAP2O75044 1071 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 ERBB2P04626 1255 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 ITGB7P26010 798 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 OR1E1P30953 314 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 CCNHP51946 323 aaPredicted RBP14.01□□□□□ -0.17
DDX39A-201ENST00000242776 CCL7P80098 99 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
DDX39A-201ENST00000242776 EFHC1Q5JVL4 640 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 LEKR1Q6ZMV7 388 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 SDR16C5Q8N3Y7 309 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 WDTC1Q8N5D0 677 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 DCAF4L2Q8NA75 395 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 FAM174AQ8TBP5 190 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 BTN2A2Q8WVV5 523 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 CCDC74AQ96AQ1 378 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 GRAMD1AQ96CP6 724 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 SGF29Q96ES7 293 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 HEPHQ9BQS7 1158 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 STK33Q9BYT3 514 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 TTYH3Q9C0H2 523 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 CLPBQ9H078 707 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 WDCPQ9H6R7 721 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 NLRC4Q9NPP4 1024 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 PIGVQ9NUD9 493 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 IMPACTQ9P2X3 320 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 MYO6Q9UM54 1294 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 AHCTF1Q8WYP5 2266 aa14.01□□□□□ -0.17
DDX39A-201ENST00000242776 I6L893 689 aaPredicted RBP14□□□□□ -0.17
DDX39A-201ENST00000242776 TERTO14746 1132 aaKnown RBP14□□□□□ -0.17
DDX39A-201ENST00000242776 TPP1O14773 563 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 EPHB6O15197 1021 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 ZNF821O75541 412 aaPredicted RBP14□□□□□ -0.17
DDX39A-201ENST00000242776 GYPCP04921 128 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 CCDC172P0C7W6 258 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 TSHRP16473 764 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 ITIH1P19827 911 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 IGFALSP35858 605 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 SULT1E1P49888 294 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 APBA1Q02410 837 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 CARD16Q5EG05 197 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 OTUD1Q5VV17 481 aaPredicted RBP14□□□□□ -0.17
DDX39A-201ENST00000242776 ESRP1Q6NXG1 681 aaKnown RBP14□□□□□ -0.17
DDX39A-201ENST00000242776 DPY19L2P1Q6NXN4 242 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 RD3Q7Z3Z2 195 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 CNGA4Q8IV77 575 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 KYQ8NBH2 561 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 C1orf131Q8NDD1 294 aaKnown RBP14□□□□□ -0.17
DDX39A-201ENST00000242776 NAT6Q93015 286 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 GFM1Q96RP9 751 aaKnown RBP14□□□□□ -0.17
DDX39A-201ENST00000242776 NAA15Q9BXJ9 866 aaKnown RBP14□□□□□ -0.17
DDX39A-201ENST00000242776 CPEB1Q9BZB8 566 aaKnown RBP14□□□□□ -0.17
DDX39A-201ENST00000242776 SLC13A1Q9BZW2 595 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 SYNCQ9H7C4 482 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 ATP13A1Q9HD20 1204 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 CAPN11Q9UMQ6 739 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 LUC7L2Q9Y383 392 aaKnown RBP14□□□□□ -0.17
DDX39A-201ENST00000242776 LRRK1Q38SD2 2015 aa14□□□□□ -0.17
DDX39A-201ENST00000242776 NOBOXO60393 691 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 DAB1O75553 588 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 RPLP0P05388 317 aaKnown RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 JMJD7P0C870 316 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 STAT1P42224 750 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 CLCN6P51797 869 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 PFN3P60673 137 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 ZBED6P86452 979 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 NYAP1Q6ZVC0 841 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 Q8N9G6 341 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 CPLX3Q8WVH0 158 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 JPH3Q8WXH2 748 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 SHC3Q92529 594 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 TSACCQ96A04 125 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 C1QTNF2Q9BXJ5 285 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 STARD5Q9NSY2 213 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 CNTN6Q9UQ52 1028 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 ANKRD36A6QL64 1941 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 C16orf96A6NNT2 1141 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 AKR1B15C9JRZ8 316 aaPredicted RBP13.99□□□□□ -0.17
DDX39A-201ENST00000242776 LMO7DNF2Z398 122 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 F8VZ95 297 aa13.99□□□□□ -0.17
DDX39A-201ENST00000242776 KRIT1O00522 736 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms