RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SEZ6LQ9BYH1 1024 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 NOL6Q9H6R4 1146 aaKnown RBP11.08□□□□□ -0.64
COPA-201ENST00000241704 EFCAB1Q9HAE3 211 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 ZDHHC7Q9NXF8 308 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 AURKCQ9UQB9 309 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 ITGB4P16144 1822 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 MYH13Q9UKX3 1938 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 A0A0A0MRY4 1105 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 ERI2A8K979 691 aaKnown RBP11.08□□□□□ -0.64
COPA-201ENST00000241704 FGF10O15520 208 aaPredicted RBP11.08□□□□□ -0.64
COPA-201ENST00000241704 IGSF6O95976 241 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 ETS1P14921 441 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 CHRNB2P17787 502 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 PGAM1P18669 254 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 CLCN2P51788 898 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 PLCL1Q15111 1095 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 C16orf59Q7L2K0 433 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 BHLHE22Q8NFJ8 381 aaPredicted RBP11.08□□□□□ -0.64
COPA-201ENST00000241704 PIWIL2Q8TC59 973 aaKnown RBP11.08□□□□□ -0.64
COPA-201ENST00000241704 SPATA13Q96N96 652 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 BIRC8Q96P09 236 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 USP29Q9HBJ7 922 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 CLDN5O00501 218 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 TRDMT1O14717 391 aaKnown RBP11.08□□□□□ -0.64
COPA-201ENST00000241704 SRP72O76094 671 aaKnown RBP11.08□□□□□ -0.64
COPA-201ENST00000241704 GP5P40197 560 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 CCDC88AQ3V6T2 1871 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 GPR107Q5VW38 600 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 XYLT1Q86Y38 959 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 ARNTL2Q8WYA1 636 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 SMG7Q92540 1137 aaKnown RBP11.08□□□□□ -0.64
COPA-201ENST00000241704 PLEKHA8Q96JA3 519 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 C1orf21Q9H246 121 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 C12orf65Q9H3J6 166 aaKnown RBP11.08□□□□□ -0.64
COPA-201ENST00000241704 C11orf49Q9H6J7 331 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 ZC4H2Q9NQZ6 224 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 NWD2Q9ULI1 1742 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 POMPQ9Y244 141 aa11.08□□□□□ -0.64
COPA-201ENST00000241704 LAMA4Q16363 1823 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 PSMD12O00232 456 aaPredicted RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 DCXO43602 365 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 MTA2O94776 668 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 SPATA31D3P0C874 917 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 GSTT2P0CG29 244 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 GSTT2BP0CG30 244 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 GRK2P25098 689 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 MGAT1P26572 445 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 SMAD3P84022 425 aaKnown RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 BMPR2Q13873 1038 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 INPP5AQ14642 412 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 SPATA31D4Q6ZUB0 917 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 CENPSQ8N2Z9 138 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 LPCAT1Q8NF37 534 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 TAMM41Q96BW9 452 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 PPP1R36Q96LQ0 422 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 HNRNPABQ99729 332 aaKnown RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 PRKD2Q9BZL6 878 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 TRMT13Q9NUP7 481 aaKnown RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 GNPTGQ9UJJ9 305 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 DNMT3LQ9UJW3 386 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 ITM2BQ9Y287 266 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 ACOT9Q9Y305 439 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 WDR27A2RRH5 827 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 PBLDP30039 288 aaPredicted RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 HOXD13P35453 343 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 SLC1A6P48664 564 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 EIF2B5Q13144 721 aaKnown RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 PERM1Q5SV97 790 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 FBXL19Q6PCT2 694 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 SERPINA13PQ6UXR4 307 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 STRADAQ7RTN6 431 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 ANKS1BQ7Z6G8 1248 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 ALDH16A1Q8IZ83 802 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 ZCCHC7Q8N3Z6 543 aaKnown RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 SLC4A11Q8NBS3 891 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 TRIM63Q969Q1 353 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 SGF29Q96ES7 293 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 SNX27Q96L92 541 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 ZFP42Q96MM3 310 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 ILKAPQ9H0C8 392 aaPredicted RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.07□□□□□ -0.64
COPA-201ENST00000241704 COPG2Q9UBF2 871 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 ARIH1Q9Y4X5 557 aaPredicted RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 TAF4O00268 1085 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 VPS26AO75436 327 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 ACRP10323 421 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 GABRR2P28476 465 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 HNRNPDQ14103 355 aaKnown RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 POU6F1Q14863 301 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 HIST2H2ACQ16777 129 aaPredicted RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 HIST2H2AA3Q6FI13 130 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 PEX5LQ8IYB4 626 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 SPPL2BQ8TCT7 592 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 DENND1AQ8TEH3 1009 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 ERLEC1Q96DZ1 483 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 LIN28AQ9H9Z2 209 aaKnown RBP11.07□□□□□ -0.64
COPA-201ENST00000241704 RWDD3Q9Y3V2 267 aa11.07□□□□□ -0.64
COPA-201ENST00000241704 LTBP4Q8N2S1 1624 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms