RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 A0A1W2PP55 124 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 A0A1W2PQ67 120 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 LNP1A1A4G5 178 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 GRID2IPA4D2P6 1211 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 C3orf70A6NLC5 250 aaPredicted RBP11.43□□□□□ -0.58
SF3B6-201ENST00000233468 MEI4A8MW99 385 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 MATN3O15232 486 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 MFSD11O43934 449 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 MAFKO60675 156 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 LEFTY1O75610 366 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 SPINK2P20155 84 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 NFKBIAP25963 317 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 ITGB7P26010 798 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 CDKN2BP42772 138 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 SUOXP51687 545 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 AP1S1P61966 158 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 CCZ1BP86790 482 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 CCZ1P86791 482 aaPredicted RBP11.43□□□□□ -0.58
SF3B6-201ENST00000233468 SHC2P98077 582 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 CYTH1Q15438 398 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 NEK5Q6P3R8 708 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 FBXL19Q6PCT2 694 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 MFSD7Q6UXD7 560 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.43□□□□□ -0.58
SF3B6-201ENST00000233468 ERN2Q76MJ5 926 aaKnown RBP11.43□□□□□ -0.58
SF3B6-201ENST00000233468 NT5DC3Q86UY8 548 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 TMEFF1Q8IYR6 380 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 RGL4Q8IZJ4 473 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 PQLC3Q8N755 202 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 PAF1Q8N7H5 531 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 TRIM58Q8NG06 486 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 OR2T34Q8NGX1 318 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 OR14C36Q8NHC7 312 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 CEP76Q8TAP6 659 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 GRIN3AQ8TCU5 1115 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 P3H4Q92791 437 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 ZNF641Q96N77 438 aaPredicted RBP11.43□□□□□ -0.58
SF3B6-201ENST00000233468 TSGA13Q96PP4 275 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 PSKH2Q96QS6 385 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 TUBGCP5Q96RT8 1024 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 NEUROG2Q9H2A3 272 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 GOLPH3Q9H4A6 298 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 ATP13A3Q9H7F0 1226 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 PLA2G2EQ9NZK7 142 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 PPP2R2CQ9Y2T4 447 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 HEY1Q9Y5J3 304 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 WASF2Q9Y6W5 498 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 PLXND1Q9Y4D7 1925 aa11.43□□□□□ -0.58
SF3B6-201ENST00000233468 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.42□□□□□ -0.58
SF3B6-201ENST00000233468 GOLGA6L9A6NEM1 432 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 METTL12A8MUP2 240 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 C1QTNF9BB2RNN3 333 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 CDX4O14627 284 aaPredicted RBP11.42□□□□□ -0.58
SF3B6-201ENST00000233468 MTSS1O43312 755 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 CST8O60676 142 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 TJP3O95049 919 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 C1QTNF9P0C862 333 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 XPAP23025 273 aaPredicted RBP11.42□□□□□ -0.58
SF3B6-201ENST00000233468 MSNP26038 577 aaKnown RBP11.42□□□□□ -0.58
SF3B6-201ENST00000233468 SERPINA4P29622 427 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 PTPN7P35236 360 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 MMP13P45452 471 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 NEK3P51956 506 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 POLR2LP62875 67 aaKnown RBP11.42□□□□□ -0.58
SF3B6-201ENST00000233468 IRX4P78413 519 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 CCDC173Q0VFZ6 552 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 TAZQ16635 292 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 ZNF805Q5CZA5 627 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 KAZNQ674X7 775 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 GDPD4Q6W3E5 623 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 SRLQ86TD4 932 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 SYT12Q8IV01 421 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 CCDC13Q8IYE1 715 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 AADATQ8N5Z0 425 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 PLD5Q8N7P1 536 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 CHST14Q8NCH0 376 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 HDAC11Q96DB2 347 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 PDLIM2Q96JY6 352 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 HSPA12BQ96MM6 686 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 PREBQ9HCU5 417 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 LZTFL1Q9NQ48 299 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 DTLQ9NZJ0 730 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 DKK3Q9UBP4 350 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 TSR3Q9UJK0 312 aaKnown RBP11.42□□□□□ -0.58
SF3B6-201ENST00000233468 SARDHQ9UL12 918 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 ACTL7AQ9Y615 435 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 CACNA1EQ15878 2313 aa11.42□□□□□ -0.58
SF3B6-201ENST00000233468 DSPP15924 2871 aaKnown RBP11.42□□□□□ -0.58
SF3B6-201ENST00000233468 hCG_1818297A0A087WSY0 165 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 TBC1D3DA0A087WVF3 549 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 TBC1D3IA0A087WXS9 549 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 TBC1D3EA0A087X179 549 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 TBC1D3KA0A087X1G2 549 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 TBC1D3FA6NER0 549 aaPredicted RBP11.41□□□□□ -0.58
SF3B6-201ENST00000233468 FAM47DPA6NHR8 397 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 TBC1D3LB9A6J9 549 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 PLRG1O43660 514 aaKnown RBP11.41□□□□□ -0.58
SF3B6-201ENST00000233468 UGT2B4P06133 528 aa11.41□□□□□ -0.58
SF3B6-201ENST00000233468 CTSLP07711 333 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms