RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 NRF1Q16656 503 aa17.66■□□□□ 0.42
PRPF19-201ENST00000227524 UGP2Q16851 508 aa17.66■□□□□ 0.42
PRPF19-201ENST00000227524 DENND6AQ8IWF6 608 aa17.66■□□□□ 0.42
PRPF19-201ENST00000227524 CNTN4Q8IWV2 1026 aa17.66■□□□□ 0.42
PRPF19-201ENST00000227524 SPATA6LQ8N4H0 392 aa17.66■□□□□ 0.42
PRPF19-201ENST00000227524 TXNDC5Q8NBS9 432 aaKnown RBP17.66■□□□□ 0.42
PRPF19-201ENST00000227524 SEMA6AQ9H2E6 1030 aa17.66■□□□□ 0.42
PRPF19-201ENST00000227524 COQ10BQ9H8M1 238 aa17.66■□□□□ 0.42
PRPF19-201ENST00000227524 GTSE1Q9NYZ3 720 aa17.66■□□□□ 0.42
PRPF19-201ENST00000227524 Q9Y3F1 56 aa17.66■□□□□ 0.42
PRPF19-201ENST00000227524 SMIM35A0A1B0GVV1 85 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 E7ENX8 843 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 H3BSA7 217 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 STMN1P16949 149 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 CPT1AP50416 773 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 SOX4Q06945 474 aaPredicted RBP17.65■□□□□ 0.42
PRPF19-201ENST00000227524 CNSTQ6PJW8 725 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 HMGCLL1Q8TB92 370 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 LRTOMTQ8WZ04 291 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 DPF3Q92784 378 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 TOP1MTQ969P6 601 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 ULBP1Q9BZM6 244 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 UNKQ9C0B0 810 aaKnown RBP17.65■□□□□ 0.42
PRPF19-201ENST00000227524 PCDHAC1Q9H158 963 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 UNC93B1Q9H1C4 597 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 MRPL46Q9H2W6 279 aaKnown RBP17.65■□□□□ 0.42
PRPF19-201ENST00000227524 MRPL40Q9NQ50 206 aaKnown RBP17.65■□□□□ 0.42
PRPF19-201ENST00000227524 SNX10Q9Y5X0 201 aa17.65■□□□□ 0.42
PRPF19-201ENST00000227524 MYADML2A6NDP7 307 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 FAM200BP0CF97 657 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 CDK4P11802 303 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 CDH2P19022 906 aaPredicted RBP17.64■□□□□ 0.42
PRPF19-201ENST00000227524 DNAJB2P25686 324 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 POLD2P49005 469 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 RABGGTBP53611 331 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 MAP3K7CLP57077 242 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 CTBP1Q13363 440 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 IKBKEQ14164 716 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 CYTH1Q15438 398 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 KLC3Q6P597 504 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 PKN3Q6P5Z2 889 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 CHSY3Q70JA7 882 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 OTOP3Q7RTS5 596 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 PIWIL4Q7Z3Z4 852 aaKnown RBP17.64■□□□□ 0.42
PRPF19-201ENST00000227524 PTAR1Q7Z6K3 402 aaPredicted RBP17.64■□□□□ 0.42
PRPF19-201ENST00000227524 LINC00523Q86TU6 105 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 TSPAN14Q8NG11 270 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 OSMRQ99650 979 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 HAUS8Q9BT25 410 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 MED10Q9BTT4 135 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 OSBPL2Q9H1P3 480 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 POMKQ9H5K3 350 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 GALNT8Q9NY28 637 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 NCKIPSDQ9NZQ3 722 aa17.64■□□□□ 0.42
PRPF19-201ENST00000227524 ARHGEF37A1IGU5 675 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 YJEFN3A6XGL0 299 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 TRIM24O15164 1050 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 PSMD3O43242 534 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 TREHO43280 583 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 MYL3P08590 195 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 DAOAP59103 153 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 RHDQ02161 417 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 SULT2A1Q06520 285 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 LRP8Q14114 963 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 PCID2Q5JVF3 399 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 REP15Q6BDI9 236 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 CARM1Q86X55 608 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 KLHDC8BQ8IXV7 354 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.64■□□□□ 0.41
PRPF19-201ENST00000227524 SGF29Q96ES7 293 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 CACNA2D2Q9NY47 1150 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 SARDHQ9UL12 918 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 GABRQQ9UN88 632 aa17.64■□□□□ 0.41
PRPF19-201ENST00000227524 HEATR9A2RTY3 570 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 TRMUO75648 421 aaKnown RBP17.63■□□□□ 0.41
PRPF19-201ENST00000227524 CSPG5O95196 566 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 ZNF23P17027 643 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 FGFR3P22607 806 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 HOXC8P31273 242 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 GJA9P57773 515 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 DNAJB13P59910 316 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 PURAQ00577 322 aaKnown RBP17.63■□□□□ 0.41
PRPF19-201ENST00000227524 STX5Q13190 355 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 SQLEQ14534 574 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 MAPRE2Q15555 327 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 FSCN1Q16658 493 aaKnown RBP17.63■□□□□ 0.41
PRPF19-201ENST00000227524 TRIM67Q6ZTA4 783 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 SPPL2BQ8TCT7 592 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 USP33Q8TEY7 942 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 TMEM40Q8WWA1 233 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 IRGQQ8WZA9 623 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 TRIB2Q92519 343 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 SLCO4A1Q96BD0 722 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 CCT7Q99832 543 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 MRPL57Q9BQC6 102 aaKnown RBP17.63■□□□□ 0.41
PRPF19-201ENST00000227524 OSBPL11Q9BXB4 747 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 FTHL17Q9BXU8 183 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 TRPV6Q9H1D0 765 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 TRPC7Q9HCX4 862 aa17.63■□□□□ 0.41
PRPF19-201ENST00000227524 DDIT4Q9NX09 232 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms