RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ELAVL2Q12926 359 aaKnown RBP10.52□□□□□ -0.72
VCL-201ENST00000211998 PTPN20Q4JDL3 420 aa10.52□□□□□ -0.72
VCL-201ENST00000211998 SEZ6Q53EL9 994 aa10.52□□□□□ -0.72
VCL-201ENST00000211998 TXNRD3Q86VQ6 643 aa10.52□□□□□ -0.72
VCL-201ENST00000211998 HTR3CQ8WXA8 447 aa10.52□□□□□ -0.72
VCL-201ENST00000211998 ASB2Q96Q27 587 aa10.52□□□□□ -0.72
VCL-201ENST00000211998 CDK5RAP1Q96SZ6 601 aaKnown RBP10.52□□□□□ -0.72
VCL-201ENST00000211998 MTMR12Q9C0I1 747 aa10.52□□□□□ -0.72
VCL-201ENST00000211998 TPK1Q9H3S4 243 aa10.52□□□□□ -0.72
VCL-201ENST00000211998 PLK2Q9NYY3 685 aa10.52□□□□□ -0.72
VCL-201ENST00000211998 CPNE3O75131 537 aaKnown RBP10.52□□□□□ -0.73
VCL-201ENST00000211998 ASS1P00966 412 aaKnown RBP10.52□□□□□ -0.73
VCL-201ENST00000211998 PENKP01210 267 aaPredicted RBP10.52□□□□□ -0.73
VCL-201ENST00000211998 MSL3P1P0C860 447 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 THRBP10828 461 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 TCF4P15884 667 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 HNRNPH3P31942 346 aaKnown RBP10.52□□□□□ -0.73
VCL-201ENST00000211998 VBP1P61758 197 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 ADGRE1Q14246 886 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 OR56A4Q8NGH8 313 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 ZFYVE1Q9HBF4 777 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 PXMP2Q9NR77 195 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 NUP50Q9UKX7 468 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 AP3M1Q9Y2T2 418 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 FAM149AA5PLN7 773 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 APOC4-APOC2K7ER74 178 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 RGS10O43665 173 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 B3GAT3O94766 335 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 APOC2P02655 101 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 RBL1P28749 1068 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 RPL22P35268 128 aaKnown RBP10.52□□□□□ -0.73
VCL-201ENST00000211998 OXCT1P55809 520 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 CCNYL2Q5T2Q4 361 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 RASGEF1CQ8N431 466 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 MEIOBQ8N635 442 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 OR2T34Q8NGX1 318 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 OR2T3Q8NH03 318 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 ELMO3Q96BJ8 720 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 VPS35Q96QK1 796 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 TMEM109Q9BVC6 243 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 RTFDC1Q9BY42 306 aaPredicted RBP10.52□□□□□ -0.73
VCL-201ENST00000211998 COQ10BQ9H8M1 238 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 UCKL1Q9NWZ5 548 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 VPS4AQ9UN37 437 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 PEX16Q9Y5Y5 336 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 IFNA16P05015 189 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 FSTL1Q12841 308 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 CDH17Q12864 832 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 IL18Q14116 193 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 ZNF470Q6ECI4 717 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 TNS4Q8IZW8 715 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 TRPV1Q8NER1 839 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 ACER1Q8TDN7 264 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 EEF1AKMT1Q8WVE0 214 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 LPGAT1Q92604 370 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 TOP1MTQ969P6 601 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 DIRAS2Q96HU8 199 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 PRMT6Q96LA8 375 aaPredicted RBP10.52□□□□□ -0.73
VCL-201ENST00000211998 NSMCE3Q96MG7 304 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 ACTR8Q9H981 624 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 NKIRAS2Q9NYR9 191 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 PTGFRNQ9P2B2 879 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 DPP7Q9UHL4 492 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 LNPEPQ9UIQ6 1025 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 ABCG2Q9UNQ0 655 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 SPACA6W5XKT8 324 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 TECPR2O15040 1411 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 AGLP35573 1532 aa10.52□□□□□ -0.73
VCL-201ENST00000211998 A0A087X1B8 175 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 CSDE1O75534 798 aaKnown RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 ALDH1A2O94788 518 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 GPC1P35052 558 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 PPIL2Q13356 520 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 PEX6Q13608 980 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 GK5Q6ZS86 529 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 ZNF621Q6ZSS3 439 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 TRIM48Q8IWZ4 208 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 ACMSDQ8TDX5 336 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 ASB12Q8WXK4 309 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 PIK3R3Q92569 461 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 VCPIP1Q96JH7 1222 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 C12orf65Q9H3J6 166 aaKnown RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 CDHR5Q9HBB8 845 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 TRPM5Q9NZQ8 1165 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 KLK14Q9P0G3 267 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 POLLQ9UGP5 575 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 PADI4Q9UM07 663 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 RGL2O15211 777 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 KHDRBS3O75525 346 aaKnown RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 UGT2B4P06133 528 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 YES1P07947 543 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 MBL2P11226 248 aaPredicted RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 S100A3P33764 101 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 RPS9P46781 194 aaKnown RBP10.51□□□□□ -0.73
VCL-201ENST00000211998 MAPK12P53778 367 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 MADCAM1Q13477 382 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 ACAP2Q15057 778 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 LCN1P1Q5VSP4 162 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 METTL7BQ6UX53 244 aa10.51□□□□□ -0.73
VCL-201ENST00000211998 SV2AQ7L0J3 742 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms