RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 H2-Eb1P04230 264 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Chrm1P12657 460 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 FpgsP48760 587 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Slc5a10Q5SWY8 596 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Abhd10Q6PE15 297 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Morc4Q8BMD7 928 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tma16Q9CR02 221 aaKnown RBP13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ubxn11Q9D572 484 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 RhojQ9ER71 214 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Aldh1a3Q9JHW9 512 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Cdh22Q9WTP5 813 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 LipaQ9Z0M5 397 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Marf1Q8BJ34 1730 aaKnown RBP13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 FAM186AQ9D9R9 1790 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ttc30a2A2AKQ8 664 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Klhl33G3UW92 533 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Prkag1O54950 330 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Scrg1O88745 98 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 HmbsP22907 361 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Mc1rQ01727 315 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gpatch4Q3TFK5 415 aaKnown RBP13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 KizQ3UXL4 695 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gm5800Q497L3 186 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Cldn11Q60771 207 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 PrkciQ62074 595 aaKnown RBP13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Utp14bQ6EJB6 756 aaKnown RBP13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Hmgxb4Q80Y32 594 aaKnown RBP13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Svs3bQ8BZH8 265 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tcf7l2Q924A0 459 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Adi1Q99JT9 179 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 LiasQ99M04 373 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tpgs1Q99MS8 303 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rgs3Q9DC04 966 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Nrf1Q9WU00 503 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Adamtsl1Q8BLI0 1745 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gm3259D3YUK0 475 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Vmn2r84D3YWE3 849 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Zfp780bE9Q2S6 806 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Sept4P28661 478 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rpl5P47962 297 aaKnown RBP13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rfx2P48379 717 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 EsrrgP62509 458 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Cdk7Q03147 346 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Zfp607aQ3TQG9 686 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Map3k10Q66L42 940 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Slc13a5Q67BT3 572 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Cd300lfQ6SJQ7 337 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ints7Q7TQK1 966 aaKnown RBP13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Znf473Q8BI67 892 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Prrg2Q8R182 198 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gfm2Q8R2Q4 779 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Smg8Q8VE18 991 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Basp1Q91XV3 226 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ifrd2Q9D8U0 441 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Spata9Q9D9R3 252 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Msl3Q9WVG9 525 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Top3bQ9Z321 862 aaKnown RBP13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ubr3Q5U430 1889 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 6720489N17RikA0A1Y7VJW0 127 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gm5751A2AHC8 147 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ssxb8B1AY40 170 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gm7073E9QAS1 335 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Smpdl3aP70158 445 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Lsg1Q3UM18 644 aaKnown RBP13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Slfn4Q3UV66 602 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ampd1Q3V1D3 745 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Nlrp9cQ66X01 1004 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Exd1Q8CDF7 570 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ccdc17Q8CE13 565 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Pcdhb19Q91Y01 801 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 B3galt6Q91Z92 325 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 ArskQ9D2L1 553 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Dus2Q9D7B1 493 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Wdr83Q9DAJ4 315 aaKnown RBP13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 RecqlQ9Z129 648 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Fam155bA2BDP1 471 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 CenpaO35216 134 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 WasP70315 520 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rnf157Q3TEL6 685 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Zfp560Q3URI6 754 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ptk7Q8BKG3 1062 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Fam151aQ8QZW3 608 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Trim8Q99PJ2 551 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Cdyl2Q9D5D8 503 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rnft1Q9DCN7 395 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Zscan12Q9Z1D7 501 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Vmn1r2A2AMT6 306 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Dpysl2O08553 572 aaKnown RBP13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 HcrtO55241 130 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Fpr-rs3O88537 343 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Pou2f3P31362 431 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 PrkcgP63318 697 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Cdh6P97326 790 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Atp5jP97450 108 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Adamts1P97857 968 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Armc7Q3UJZ3 198 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Cfhr2Q4LDF6 332 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gpr19Q61121 415 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Nr6a1Q64249 495 aa13.34□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 UnkQ8BL48 810 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms