RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Ppp1r26Q6A025 1163 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Tas2r109Q7M707 316 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Olfr1225Q7TR01 311 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Olfr1196Q7TR14 314 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Dclk3Q8BWQ5 790 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Fem1abQ8C0T1 654 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Trpm8Q8R4D5 1104 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Olfr693Q8VF89 316 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Grip1Q925T6 1127 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Kcne2Q9D808 123 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Tnfrsf25B1AWN9 411 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Tnk2O54967 1055 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rrm2bQ6PEE3 351 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Nacc1Q7TSZ8 514 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Nod2Q8K3Z0 1020 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Vmn1r208Q8R275 308 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Fbxl20Q9CZV8 436 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Eaf1Q9D4C5 268 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ppil6Q9D6D8 278 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cyb5r1Q9DB73 305 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Emc7Q9EP72 241 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Kif24Q6NWW5 1356 aa9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Phldb1Q6PDH0 1371 aaKnown RBP9.03□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Scgb1b10A0A087WPW0 93 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm7792A0A0J9YU01 481 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm3183D3YUJ6 481 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Pcdh17E9PXF0 1157 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm3139J3QK78 481 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm3106J3QPH3 481 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Olfr319L7MTY4 306 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Itgb3O54890 787 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Cdh16O88338 830 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gstm5P48774 224 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 PtpreP49446 699 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 4930480E11RikQ0VG34 394 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ddx51Q6P9R1 639 aaKnown RBP9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 CipcQ8R0W1 432 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Fbxo33Q8VE08 562 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Mid1ip1Q9CQ20 182 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Trappc5Q9CQA1 188 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Trap1Q9CQN1 706 aaKnown RBP9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Vmn1r44Q9EQ47 310 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Vmn1r47Q9EQ51 310 aa9.02□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Mamld1P0C6A2 803 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mbd3l2Q3UXB0 228 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Pon3Q62087 354 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Spice1Q8C804 860 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 TwnkQ8CIW5 685 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Dnmt3lQ9CWR8 421 aaKnown RBP9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tubb4aQ9D6F9 444 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Usp12Q9D9M2 370 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ddx59Q9DBN9 619 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Bex1Q9R224 128 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gm4924A0A1B0GR71 966 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Galntl6E5D8G1 601 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 IfnabL7MTU6 190 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mtnd4P03911 459 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mup5P11591 180 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Vmn2r26Q6TAC4 855 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Nudt13Q8JZU0 352 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Znf445Q8R2V3 986 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Dmbx1Q91ZK4 381 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gorasp2Q99JX3 451 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Cdca3Q99M54 266 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Acad8Q9D7B6 413 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tas2r105Q9JKT4 300 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Prg4Q9JM99 1054 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Sik3Q6P4S6 1311 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Srp54P14576 504 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 GnaqP21279 359 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Sf3b6P59708 125 aaKnown RBP9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 HnrnpkP61979 463 aaKnown RBP9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Bmp1P98063 991 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ppm1hQ3UYC0 513 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tvp23aQ6NVH0 222 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tlr11Q6R5P0 926 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Zc3h14Q8BJ05 735 aaKnown RBP9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 MtrrQ8C1A3 696 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mterf3Q8R3J4 412 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Evi2bQ8VD58 444 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ccdc115Q8VE99 180 aaKnown RBP9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Nphs2Q91X05 385 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 DeraQ91YP3 318 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 3830403N18RikQ9D6C3 208 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Cldn10Q9Z0S6 231 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Olfr1555-ps1A0A140LHT7 321 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Vmn2r120E9PX34 856 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gm9493F6SVV1 192 aaKnown RBP9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gpld1O70362 837 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gnao1P18872 354 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 AregP31955 248 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Rbp3P49194 1234 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Epb42P49222 691 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Irx2P81066 474 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Fgfr4Q03142 799 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gprin1Q3UNH4 932 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 CoilQ5SU73 570 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Usp17leQ7M764 540 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tmem202Q80W35 275 aa9.02□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Nup88Q8CEC0 753 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms