RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Oit3Q8R4V5 546 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 PdgfdQ925I7 370 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 MydgfQ9CPT4 166 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Rgs10Q9CQE5 181 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 PclafQ9CQX4 110 aaKnown RBP15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Cdyl2Q9D5D8 503 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Syvn1Q9DBY1 612 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Spag4Q9JJF2 443 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Sept6Q9R1T4 434 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 LctF8VPT3 1931 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Gm5751A2AHC8 147 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Olfr1049A2ARZ0 308 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Ssxb8B1AY40 170 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Vmn2r88L7N1W8 857 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Vmn2r1O70410 912 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Rdh7O88451 316 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 P01673 111 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 TnfP06804 235 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Tap2P36371 702 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Mc4rP56450 332 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Larp7Q05CL8 570 aaKnown RBP15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Mgat3Q10470 538 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Ptcd3Q14C51 685 aaKnown RBP15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Col28a1Q2UY11 1141 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Fam35aQ3UEN2 891 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Gstt1Q64471 240 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Rps27lQ6ZWY3 84 aaKnown RBP15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Kank2Q8BX02 843 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Ccdc90bQ8C3X2 256 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Acsm2Q8K0L3 575 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Stx5Q8K1E0 355 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Gtse1Q8R080 741 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Serpina3nQ91WP6 418 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Pcdhb2Q91Y00 799 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Znf687Q9D2D7 1237 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 MecrQ9DCS3 373 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Trim54Q9ERP3 366 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Syt5Q9R0N5 386 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Med20Q9R0X0 212 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 PtprfA2A8L5 1898 aa15.12■□□□□ 0.01
Nup54-201ENSMUST00000038514 Gm6509A0A0J9YUV1 481 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Gm6351K9J7D1 481 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Cbx2P30658 519 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Csf3rP40223 837 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Il12bP43432 335 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Rnf157Q3TEL6 685 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Gm4981Q3ULJ8 291 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Sema3cQ62181 751 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 ChpfQ6IQX7 774 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Senp5Q6NXL6 749 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Trit1Q80UN9 467 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Reps2Q80XA6 521 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 IfneQ80ZF2 192 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Ireb2Q811J3 963 aaKnown RBP15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Cdkn2aipQ8BI72 563 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 TwnkQ8CIW5 685 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Sulf1Q8K007 870 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Tdrd7Q8K1H1 1086 aaKnown RBP15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Rsl24d1Q99L28 163 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Ten1Q9D7K2 161 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Maged2Q9ER67 616 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Smpd3Q9JJY3 655 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Vmn1r2A2AMT6 306 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Vmn2r121A2BE32 847 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Gm3259D3YUK0 475 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Vmn1r76F8VQ63 324 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Gm43302L7N1X8 611 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 ZfaP23607 742 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Prox1P48437 737 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Itga11P61622 1188 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Gbp10Q000W5 611 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Mc1rQ01727 315 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Fam83fQ3UKU4 495 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Slfn4Q3UV66 602 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Q6GQU0 248 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 PoliQ6R3M4 717 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Scd4Q6T707 353 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Tas2r129Q7M709 320 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 C6.1alQ7M757 291 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Znf423Q80TS5 1292 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Pnma2Q8BHK0 365 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Nipal1Q8BMW7 416 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 ThtpaQ8JZL3 224 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Gmpr2Q99L27 348 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Ttc25Q9D4B2 624 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Cngb3Q9JJZ9 694 aa15.11■□□□□ 0.01
Nup54-201ENSMUST00000038514 Ankrd34aB2RW11 495 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Gm2832F7AEC7 200 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Ephx2P34914 554 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Tlx1P43345 332 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Lim2P56563 173 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Adcyap1r1P70205 496 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 AnpepP97449 966 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Slc22a23Q3UHH2 689 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Tmed1Q3V009 227 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Btg1-ps1Q3V0S2 161 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Btg1-ps2Q3V0X0 161 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Rab26Q504M8 260 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Tbc1d12Q6A039 696 aa15.1■□□□□ 0.01
Nup54-201ENSMUST00000038514 Rad9bQ6WBX7 403 aa15.1■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms