RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Smpd4Q6ZPR5 823 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Abcg2Q7TMS5 657 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Lair1Q8BG84 263 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Fam49aQ8BHZ0 323 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Slc7a4Q8BLQ7 635 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Dennd1cQ8CFK6 786 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gtse1Q8R080 741 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Fbxw7Q8VBV4 629 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Mospd1Q8VEL0 213 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 IrgqQ8VIM9 583 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Il17rbQ9JIP3 499 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tnfrsf10bQ9QZM4 381 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Akap5D3YVF0 745 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 C7D3YXF5 845 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cyp2w1E9Q816 493 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm2832F7AEC7 200 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm10479K7N6H4 105 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Col28a1Q2UY11 1141 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Parp3Q3ULW8 533 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 CybbQ61093 570 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 PostnQ62009 838 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cxcr1Q810W6 351 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ccdc32Q8BS39 179 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tmem252Q8C353 183 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tdrd7Q8K1H1 1086 aaKnown RBP13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Zcchc14Q8VIG0 956 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Crtc3Q91X84 619 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sntg2Q925E0 539 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Kif19Q99PT9 997 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Txndc9Q9CQ79 226 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tnfaip8l2Q9D8Y7 184 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cyp4v2Q9DBW0 525 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sept6Q9R1T4 434 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 NinQ61043 2035 aa13.55□□□□□ -0.24
Nup88-201ENSMUST00000035283 Klhdc7bA0A286YD60 1263 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Zfp384E9Q1A5 584 aaKnown RBP13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Olfr596F8VQ26 312 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 F830016B08RikG3UWE2 416 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Grip2G3XA20 1042 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 MrasO08989 208 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rhox6O70238 227 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Kpna2P52293 529 aaKnown RBP13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Lrig1P70193 1091 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 NyxP83503 476 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sec31bQ3TZ89 1158 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Foxred2Q3USW5 665 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Q3V0E1 1183 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Lrrc47Q505F5 581 aaKnown RBP13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rnf145Q5SWK7 663 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Icam5Q60625 917 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Arhgap30Q640N3 1101 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ahcyl2Q68FL4 613 aaKnown RBP13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Armcx2Q6A058 784 aaKnown RBP13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Dnajc16Q80TN4 772 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Kank2Q8BX02 843 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 TpbglQ8C013 384 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Frs2Q8C180 508 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Stx5Q8K1E0 355 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Abhd11Q8K4F5 307 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 OscarQ8VBT3 265 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Isoc1Q91V64 297 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cyp2c70Q91W64 489 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 DdoQ922Z0 341 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Lrrc18Q9CQ07 262 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Zfp655Q9CZP3 541 aaKnown RBP13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tomm70Q9CZW5 611 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Syap1Q9D5V6 365 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 TcimQ9D915 106 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Q9D979 236 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Syvn1Q9DBY1 612 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 NplQ9DCJ9 320 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gprc5dQ9JIL6 344 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cyhr1Q9QXA1 311 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ddx39bQ9Z1N5 428 aaKnown RBP13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Nup205A0A0J9YUD5 2061 aaKnown RBP13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 XntrpcF8VQM8 1264 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cyp2b19O55071 492 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Dmp1O55188 503 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Klk1b8P07628 261 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 ArsaP50428 506 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 NadkP58058 439 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Lpar1P61793 364 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ndst1Q3UHN9 882 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Xkr4Q5GH67 647 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Arcn1Q5XJY5 511 aaKnown RBP13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gxylt2Q810K9 444 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 GnsQ8BFR4 544 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rab15Q8K386 212 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Smap1Q91VZ6 440 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Nudt7Q99P30 236 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Pole4Q9CQ36 118 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Syde1Q9DBZ9 737 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Smpd3Q9JJY3 655 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 St6galnac1Q9QZ39 526 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tnni1Q9WUZ5 187 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cldn3Q9Z0G9 219 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rpl9-ps1S4R1R7 191 aa13.54□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ccdc120A2AEV7 629 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Vmn1r3A2AMT7 306 aa13.53□□□□□ -0.24
Nup88-201ENSMUST00000035283 Skint6A7XUZ6 1240 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms