RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Homer2Q9QWW1 354 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Copg1Q9QZE5 874 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Cldn3Q9Z0G9 219 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Slc23a1Q9Z2J0 605 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ttc3O88196 1979 aaKnown RBP16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Fam81bA0A140LI28 432 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Trim5E9PV98 497 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ccdc62E9PVD1 701 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Hsd17b7O88736 334 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Cbx3P23198 183 aaKnown RBP16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Dpep1P31428 410 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Htr2cP34968 459 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 FynP39688 537 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Morf4l1P60762 362 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Traf6P70196 530 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Micall2Q3TN34 1009 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Rbm44Q3V089 1013 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 PostnQ62009 838 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Noc4lQ8BHY2 516 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Tgm6Q8BM11 706 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Amz1Q8BVF9 502 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Wdr11Q8K1X1 1223 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Unc93b1Q8VCW4 598 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Mrps5Q99N87 432 aaKnown RBP16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Batf3Q9D275 118 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Wnt8bQ9WUD6 350 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Psmd13Q9WVJ2 376 aa16.36■□□□□ 0.21
Trim28-201ENSMUST00000005705 Zscan4eA0A1B0GRE8 505 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Skint6A7XUZ6 1240 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Vmn2r24D3YUI0 854 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Cntnap3E9PY62 1287 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Sema3aO08665 772 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Lamp2P17047 415 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Il12aP43431 215 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Acot8P58137 320 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Olfr463Q5SW49 311 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Olfr462Q5SW50 311 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Icam5Q60625 917 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Dlgap2Q8BJ42 1059 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Anapc2Q8BZQ7 837 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Aqp12Q8CHJ2 290 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Cog4Q8R1U1 785 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Zdhhc7Q91WU6 308 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Prmt7Q922X9 692 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Pole4Q9CQ36 118 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Trpm5Q9JJH7 1158 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 VapbQ9QY76 243 aaKnown RBP16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Zscan12Q9Z1D7 501 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Vmn2r61L7N2B8 865 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gabrb3P63080 473 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 PrkacbP68181 351 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 AcadsQ07417 412 aaKnown RBP16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Hsdl2Q2TPA8 490 aaKnown RBP16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Tmem237Q3V0J1 427 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Pnpla1Q3V1D5 599 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 EfsQ64355 560 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Scd4Q6T707 353 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ints7Q7TQK1 966 aaKnown RBP16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Mapkap1Q8BKH7 522 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Zbtb8bQ8CII0 484 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Slc35c2Q8VCX2 364 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Tbc1d19Q8VDV7 526 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Mob2Q8VI63 235 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Atpaf2Q91YY4 289 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Tcf7l2Q924A0 459 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Dctn2Q99KJ8 402 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ddx59Q9DBN9 619 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 LactbQ9EP89 551 aa16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ddx21Q9JIK5 851 aaKnown RBP16.35■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gm28168A0A087WNP1 180 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gm4756A0A140LIS8 335 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Vmn1r2A2AMT6 306 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 JhyE9Q793 770 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Matn2O08746 956 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Sult1e1P49891 295 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 JrkQ60976 557 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Snx17Q8BVL3 470 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Traf7Q922B6 594 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 KelQ9EQF2 713 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Stx12Q9ER00 274 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Fzd9Q9R216 592 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ssxb8B1AY40 170 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Zbed5B2RPU8 756 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gpc4P51655 557 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Psme3P61290 254 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 TankP70347 448 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gstt1Q64471 240 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 IqceQ6PCQ0 778 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Rbm22Q8BHS3 420 aaKnown RBP16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Rbmx2Q8R0F5 326 aaKnown RBP16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 DenrQ9CQJ6 198 aaKnown RBP16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Rec114Q9CWH4 259 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 TrirQ9D735 173 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Rnf11Q9QYK7 154 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gm5751A2AHC8 147 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Skint1A7TZE6 364 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Vmn2r96E9PZU5 664 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Pold2O35654 469 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gucy2eP52785 1108 aa16.34■□□□□ 0.21
Trim28-201ENSMUST00000005705 Pou2f2Q00196 463 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms