RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 MYEOVQ96EZ4 313 aa11.78□□□□□ -0.52
MECP2-226ENST00000640414 RPL10LQ96L21 214 aaKnown RBP11.78□□□□□ -0.52
MECP2-226ENST00000640414 PACSIN1Q9BY11 444 aa11.78□□□□□ -0.52
MECP2-226ENST00000640414 IRX2Q9BZI1 471 aaPredicted RBP11.78□□□□□ -0.52
MECP2-226ENST00000640414 TRMT1Q9NXH9 659 aaKnown RBP11.78□□□□□ -0.52
MECP2-226ENST00000640414 SARDHQ9UL12 918 aa11.78□□□□□ -0.52
MECP2-226ENST00000640414 SRPK3Q9UPE1 567 aa11.78□□□□□ -0.52
MECP2-226ENST00000640414 PPP2R2CQ9Y2T4 447 aa11.78□□□□□ -0.52
MECP2-226ENST00000640414 CREBBPQ92793 2442 aa11.78□□□□□ -0.52
MECP2-226ENST00000640414 M0QYV0 167 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 TULP2O00295 520 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 IRAK2O43187 625 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 LSM8O95777 96 aaKnown RBP11.77□□□□□ -0.53
MECP2-226ENST00000640414 ZBED1O96006 694 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 H2AFZP0C0S5 128 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 CCDC175P0C221 793 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 LIPCP11150 499 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 UGT1A5P35504 534 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 CASRP41180 1078 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 STK19P49842 368 aaPredicted RBP11.77□□□□□ -0.53
MECP2-226ENST00000640414 CLDN2P57739 230 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 TAS2R38P59533 333 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 RPS24P62847 133 aaKnown RBP11.77□□□□□ -0.53
MECP2-226ENST00000640414 ECT2LQ008S8 904 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 PM20D1Q6GTS8 502 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 H2AFVQ71UI9 128 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 PHF13Q86YI8 300 aaPredicted RBP11.77□□□□□ -0.53
MECP2-226ENST00000640414 REXO1L1PQ8IX06 675 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 CCAR2Q8N163 923 aaKnown RBP11.77□□□□□ -0.53
MECP2-226ENST00000640414 FBXO39Q8N4B4 442 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 C1orf131Q8NDD1 294 aaKnown RBP11.77□□□□□ -0.53
MECP2-226ENST00000640414 RNF139Q8WU17 664 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 SLC35F5Q8WV83 523 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 IFT43Q96FT9 208 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 LIN37Q96GY3 246 aaPredicted RBP11.77□□□□□ -0.53
MECP2-226ENST00000640414 ULBP1Q9BZM6 244 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 UBXN6Q9BZV1 441 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 LACRTQ9GZZ8 138 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 NCKIPSDQ9NZQ3 722 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 PLEKHB1Q9UF11 243 aaPredicted RBP11.77□□□□□ -0.53
MECP2-226ENST00000640414 CEP83Q9Y592 693 aa11.77□□□□□ -0.53
MECP2-226ENST00000640414 ZFC3H1O60293 1989 aaKnown RBP11.77□□□□□ -0.53
MECP2-226ENST00000640414 A0A1W2PQU0 124 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 USP27XA6NNY8 438 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 MUSKO15146 869 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 ACSL4O60488 711 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 GABBR2O75899 941 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 IPO7O95373 1038 aaKnown RBP11.76□□□□□ -0.53
MECP2-226ENST00000640414 HGFP14210 728 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 MMP8P22894 467 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 ARHGAP25P42331 645 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 NSFP46459 744 aaKnown RBP11.76□□□□□ -0.53
MECP2-226ENST00000640414 SLC11A2P49281 568 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 HNRNPKP61978 463 aaKnown RBP eCLIP11.76□□□□□ -0.532e-6■■■■□ 23.1
MECP2-226ENST00000640414 CENPCQ03188 943 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 PTP4A2Q12974 167 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 CDH18Q13634 790 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 SPIDRQ14159 915 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 C2CD6Q53TS8 623 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 MANEAQ5SRI9 462 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 RNF219Q5W0B1 726 aaPredicted RBP11.76□□□□□ -0.53
MECP2-226ENST00000640414 BSPRYQ5W0U4 402 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 NADSYN1Q6IA69 706 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 PMF1Q6P1K2 205 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 GCNT7Q6ZNI0 430 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 B3GNT8Q7Z7M8 397 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 ZSCAN30Q86W11 494 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 MCOLN2Q8IZK6 566 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 APCDD1Q8J025 514 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 ZSCAN1Q8NBB4 408 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 ADNPQ9H2P0 1102 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 PREBQ9HCU5 417 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 KCND1Q9NSA2 647 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 ADAM22Q9P0K1 906 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 HESX1Q9UBX0 185 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 SALL4Q9UJQ4 1053 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 DUSP10Q9Y6W6 482 aa11.76□□□□□ -0.53
MECP2-226ENST00000640414 RP1P56715 2156 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 ANKRD62A6NC57 917 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 YJEFN3A6XGL0 299 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 E7ENQ6 273 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
MECP2-226ENST00000640414 PJA2O43164 708 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 ZSCAN12O43309 604 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 LUC7L3O95232 432 aaKnown RBP11.75□□□□□ -0.53
MECP2-226ENST00000640414 MOCS3O95396 460 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 IGLV3-27P01718 113 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 NME1P15531 152 aaKnown RBP11.75□□□□□ -0.53
MECP2-226ENST00000640414 NUMBP49757 651 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 RGS7P49802 495 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 VAV2P52735 878 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 EIF3IQ13347 325 aaKnown RBP11.75□□□□□ -0.53
MECP2-226ENST00000640414 FZD2Q14332 565 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 NR0B2Q15466 257 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 ZNF284Q2VY69 593 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 DEFB133Q30KQ1 61 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 FAM46CQ5VWP2 391 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 OR6B2Q6IFH4 312 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 Q6ZSR6 202 aa11.75□□□□□ -0.53
MECP2-226ENST00000640414 RAB11FIP2Q7L804 512 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms