RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 IL1R2P27930 398 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 EIF4A3P38919 411 aaKnown RBP17.95■□□□□ 0.46
PTPN11-207ENST00000639857 RXRGP48443 463 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 CSNK1DP48730 415 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 SLC25A11Q02978 314 aaKnown RBP17.95■□□□□ 0.46
PTPN11-207ENST00000639857 ASTE1Q2TB18 679 aaPredicted RBP17.95■□□□□ 0.46
PTPN11-207ENST00000639857 ATXN7L2Q5T6C5 722 aaPredicted RBP17.95■□□□□ 0.46
PTPN11-207ENST00000639857 SARM1Q6SZW1 724 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 LEKR1Q6ZMV7 388 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 H2AFVQ71UI9 128 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 ARHGAP12Q8IWW6 846 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 OR6K2Q8NGY2 324 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 ZNF564Q8TBZ8 553 aaPredicted RBP17.95■□□□□ 0.46
PTPN11-207ENST00000639857 ASB12Q8WXK4 309 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 CTNNBL1Q8WYA6 563 aaPredicted RBP17.95■□□□□ 0.46
PTPN11-207ENST00000639857 CAMK1GQ96NX5 476 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 TUBGCP5Q96RT8 1024 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 SLC39A8Q9C0K1 460 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 DEF6Q9H4E7 631 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 ABHD10Q9NUJ1 306 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.95■□□□□ 0.46
PTPN11-207ENST00000639857 LHX3Q9UBR4 397 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 ZFR2Q9UPR6 939 aaKnown RBP17.95■□□□□ 0.46
PTPN11-207ENST00000639857 ACACBO00763 2458 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 SHROOM3Q8TF72 1996 aa17.95■□□□□ 0.46
PTPN11-207ENST00000639857 MFAP3LO75121 409 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 RARAP10276 462 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 PAPOLAP51003 745 aaKnown RBP17.94■□□□□ 0.46
PTPN11-207ENST00000639857 FAM193AP78312 1265 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 IL10RBQ08334 325 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 FOXC1Q12948 553 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 CYTH1Q15438 398 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 HADHQ16836 314 aaKnown RBP17.94■□□□□ 0.46
PTPN11-207ENST00000639857 SMTNL2Q2TAL5 461 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 TMCO4Q5TGY1 634 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 TMCO3Q6UWJ1 677 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 POLNQ7Z5Q5 900 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 CNGA4Q8IV77 575 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 NPWQ8N729 165 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 RNF214Q8ND24 703 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 FAM71BQ8TC56 605 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 RHBDD1Q8TEB9 315 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 KLHDC7BQ96G42 594 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 CELF6Q96J87 481 aaKnown RBP17.94■□□□□ 0.46
PTPN11-207ENST00000639857 KLHL32Q96NJ5 620 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 ZNF599Q96NL3 588 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 SP110Q9HB58 689 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 APOBEC2Q9Y235 224 aaKnown RBP17.94■□□□□ 0.46
PTPN11-207ENST00000639857 HS3ST3A1Q9Y663 406 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 LRRK1Q38SD2 2015 aa17.94■□□□□ 0.46
PTPN11-207ENST00000639857 TSPAN11A1L157 253 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 J3KR12 359 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 AREL1O15033 823 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 SLC31A1O15431 190 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 PRLRP16471 622 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 EPHA8P29322 1005 aaPredicted RBP17.93■□□□□ 0.46
PTPN11-207ENST00000639857 SERPINB6P35237 376 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 SEL1L3Q68CR1 1132 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 ABI3BPQ7Z7G0 1075 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 DCP2Q8IU60 420 aaKnown RBP17.93■□□□□ 0.46
PTPN11-207ENST00000639857 DENND6BQ8NEG7 585 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 SAP25Q8TEE9 199 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 HSPH1Q92598 858 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 ZNF641Q96N77 438 aaPredicted RBP17.93■□□□□ 0.46
PTPN11-207ENST00000639857 LENG8Q96PV6 779 aaPredicted RBP17.93■□□□□ 0.46
PTPN11-207ENST00000639857 CSPG4P5Q96PW8 444 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 C1QTNF2Q9BXJ5 285 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 SLC17A9Q9BYT1 436 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 NEUROG3Q9Y4Z2 214 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 PTPRBP23467 1997 aa17.93■□□□□ 0.46
PTPN11-207ENST00000639857 A6NNZ2 444 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 KCNK3O14649 394 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 AKR1B10O60218 316 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 PALMO75781 387 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 TMEM253P0C7T8 217 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 FTH1P19P0C7X4 201 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 TCF4P15884 667 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 GKP32189 559 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 MAN1A1P33908 653 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 ABL2P42684 1182 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 NSUN2Q08J23 767 aaKnown RBP eCLIP17.92■□□□□ 0.46
PTPN11-207ENST00000639857 SHBQ15464 509 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 BRAT1Q6PJG6 821 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 KYAT3Q6YP21 454 aaKnown RBP17.92■□□□□ 0.46
PTPN11-207ENST00000639857 RAB44Q7Z6P3 723 aaPredicted RBP17.92■□□□□ 0.46
PTPN11-207ENST00000639857 SPATS2Q86XZ4 545 aaKnown RBP17.92■□□□□ 0.46
PTPN11-207ENST00000639857 ADAMTS14Q8WXS8 1223 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 TSC1Q92574 1164 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 IFT43Q96FT9 208 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 BTBD6Q96KE9 485 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 PCDH18Q9HCL0 1135 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 GPR27Q9NS67 375 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 CTTNBP2NLQ9P2B4 639 aa17.92■□□□□ 0.46
PTPN11-207ENST00000639857 IPO11Q9UI26 975 aaKnown RBP17.92■□□□□ 0.46
PTPN11-207ENST00000639857 DFFAO00273 331 aa17.91■□□□□ 0.46
PTPN11-207ENST00000639857 NEMP1O14524 444 aa17.91■□□□□ 0.46
PTPN11-207ENST00000639857 SPINT1O43278 529 aa17.91■□□□□ 0.46
PTPN11-207ENST00000639857 TNFSF14O43557 240 aa17.91■□□□□ 0.46
PTPN11-207ENST00000639857 PROSCO94903 275 aa17.91■□□□□ 0.46
PTPN11-207ENST00000639857 DKK1O94907 266 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms