RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 NIPAL4Q0D2K0 466 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 STX5Q13190 355 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 PRKG1Q13976 671 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 DGUOKQ16854 277 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 RFX6Q8HWS3 928 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 TMEM35BQ8NCS4 154 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 FAM156AQ8NDB6 213 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 GMCL1P1Q8NEA9 526 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 BPIFB6Q8NFQ5 453 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 TOR1AIP2Q8NFQ8 470 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 SIGLEC10Q96LC7 697 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 AIFM2Q9BRQ8 373 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF577Q9BSK1 485 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 FTHL17Q9BXU8 183 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 SPAG4Q9NPE6 437 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 GPRC5CQ9NQ84 441 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 SNTG2Q9NY99 539 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 SAE1Q9UBE0 346 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 UBA2Q9UBT2 640 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 ADAM28Q9UKQ2 775 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 MTSS1O43312 755 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 UPK1BO75841 260 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 IL12AP29459 219 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 RRM2P31350 389 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 SSTR3P32745 418 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 RARRES1P49788 294 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 ATN1P54259 1190 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 GALK2Q01415 458 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 VAC14Q08AM6 782 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 KRR1Q13601 381 aaKnown RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 PDK2Q15119 407 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 SKIV2LQ15477 1246 aaKnown RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 CTF1Q16619 201 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 C8orf82Q6P1X6 216 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 TRMT10BQ6PF06 316 aaKnown RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 SLCO6A1Q86UG4 719 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 ELMOD2Q8IZ81 293 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 NLGN2Q8NFZ4 835 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 GIMAP1Q8WWP7 306 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 CDKL2Q92772 493 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 MUL1Q969V5 352 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 FBXL20Q96IG2 436 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 FUNDC2Q9BWH2 189 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 TRIM15Q9C019 465 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 MTMR12Q9C0I1 747 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 PCDHAC1Q9H158 963 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 NECTIN3Q9NQS3 549 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 RBAKQ9NYW8 714 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 TMEM216Q9P0N5 145 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 TMEM181Q9P2C4 612 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 WBP11Q9Y2W2 641 aaKnown RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 TCP10L2B9ZVM9 353 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 E7ENX8 843 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 H0YIN7 160 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 BBOX1O75936 387 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 GABARAPO95166 117 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 MYCP01106 439 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 CALCAP01258 141 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 HLA-DOAP06340 250 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 TCN1P20061 433 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 FASP25445 335 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 RPL14P50914 215 aaKnown RBP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 DYNLT1P63172 113 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 POU6F1Q14863 301 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF484Q5JVG2 852 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 FAM45BPQ6NSW5 357 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 PRSS48Q7RTY5 328 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 DHFR2Q86XF0 187 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 CLEC10AQ8IUN9 316 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 TMEM161BQ8NDZ6 487 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 RHOXF1Q8NHV9 184 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 SPATA18Q8TC71 538 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 FAM45AQ8TCE6 357 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 CYGBQ8WWM9 190 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 UBXN10Q96LJ8 280 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 CPXM1Q96SM3 734 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 ZBED2Q9BTP6 218 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.13□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF221Q9UK13 617 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 CDYLQ9Y232 598 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 GPSM3Q9Y4H4 160 aa12.13□□□□□ -0.47
CAPN3-221ENST00000638141 PRORSD1PA6NEY8 169 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 C16orf96A6NNT2 1141 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 SHOXO15266 292 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 SYNCRIPO60506 623 aaKnown RBP12.12□□□□□ -0.47
CAPN3-221ENST00000638141 TRIM13O60858 407 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 ENPP1P22413 925 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 GARSP41250 739 aaKnown RBP12.12□□□□□ -0.47
CAPN3-221ENST00000638141 CLCQ05315 142 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 FXNQ16595 210 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 RSBN1Q5VWQ0 802 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-221ENST00000638141 ZCCHC8Q6NZY4 707 aaKnown RBP12.12□□□□□ -0.47
CAPN3-221ENST00000638141 KCNT2Q6UVM3 1135 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 LYSMD2Q8IV50 215 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 TAB3Q8N5C8 712 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-221ENST00000638141 CANT1Q8WVQ1 401 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 PEX13Q92968 403 aa12.12□□□□□ -0.47
CAPN3-221ENST00000638141 MARVELD3Q96A59 401 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms