RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 SETMARQ53H47 684 aaPredicted RBP12.88□□□□□ -0.35
CTSD-208ENST00000636843 AGBL4Q5VU57 503 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 TAF3Q5VWG9 929 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 OR6B2Q6IFH4 312 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 ACAD10Q6JQN1 1059 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 PPP1R2P3Q6NXS1 205 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 KANSL1Q7Z3B3 1105 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 SPATS2Q86XZ4 545 aaKnown RBP12.88□□□□□ -0.35
CTSD-208ENST00000636843 PIP4K2CQ8TBX8 421 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 PCDHB18PQ96TA0 734 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 VIPAS39Q9H9C1 493 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 PREBQ9HCU5 417 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 RRN3Q9NYV6 651 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 CTTNBP2NLQ9P2B4 639 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 UVRAGQ9P2Y5 699 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 TMEM59LQ9UK28 342 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 VPS28Q9UK41 221 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 VANGL2Q9ULK5 521 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 TTC7AQ9ULT0 858 aaPredicted RBP12.88□□□□□ -0.35
CTSD-208ENST00000636843 TBC1D30Q9Y2I9 924 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
CTSD-208ENST00000636843 OR51B4Q9Y5P0 310 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 PRAMEF26H0Y7S4 382 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 RNGTTO60942 597 aaKnown RBP12.88□□□□□ -0.35
CTSD-208ENST00000636843 DAB1O75553 588 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 GRAP2O75791 330 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 CYP1A2P05177 515 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 MAT2AP31153 395 aaKnown RBP12.88□□□□□ -0.35
CTSD-208ENST00000636843 NOS2P35228 1153 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 NUMBP49757 651 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 CDH4P55283 916 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 GABPB1Q06547 395 aaPredicted RBP12.88□□□□□ -0.35
CTSD-208ENST00000636843 CCDC15Q0P6D6 951 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 CNTN1Q12860 1018 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 NME3Q13232 169 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 CASP8Q14790 479 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 OLFML1Q6UWY5 402 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 TRIM72Q6ZMU5 477 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 FAM183BPQ6ZVS7 135 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 Q6ZVU0 165 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 SLC26A9Q7LBE3 791 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 CACTIN-AS1Q8N1I8 211 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 SH2D3CQ8N5H7 860 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 OR52K2Q8NGK3 314 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 TRIM11Q96F44 468 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 NAP1L3Q99457 506 aaPredicted RBP12.88□□□□□ -0.35
CTSD-208ENST00000636843 CARD9Q9H257 536 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 GOLPH3Q9H4A6 298 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 TMEM51Q9NW97 253 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 SMARCAL1Q9NZC9 954 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 HS3ST2Q9Y278 367 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 HS3ST4Q9Y661 456 aa12.88□□□□□ -0.35
CTSD-208ENST00000636843 DDX3YO15523 660 aaKnown RBP12.87□□□□□ -0.35
CTSD-208ENST00000636843 PAGE1O75459 146 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 MYBL1P10243 752 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 CKMT2P17540 419 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 SLC6A3Q01959 620 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 TARDBPQ13148 414 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTSD-208ENST00000636843 PPP2R5EQ16537 467 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 CLEC16AQ2KHT3 1053 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 HES3Q5TGS1 186 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 NEK5Q6P3R8 708 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 FBXL19Q6PCT2 694 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 ZDHHC17Q8IUH5 632 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 PASD1Q8IV76 773 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 IFT20Q8IY31 132 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 CCDC114Q96M63 670 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 NRSN2Q9GZP1 204 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 MUC3BQ9H195 1237 aa12.87□□□□□ -0.35
CTSD-208ENST00000636843 CELSR3Q9NYQ7 3312 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 M0QYT0 321 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 ERBB2P04626 1255 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 ABCG1P45844 678 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 IRAK1P51617 712 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 RTP5Q14D33 572 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 POM121L1PQ3SYA9 428 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 BRMS1LQ5PSV4 323 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 ACBD5Q5T8D3 534 aaPredicted RBP12.86□□□□□ -0.35
CTSD-208ENST00000636843 C14orf80Q86SX3 495 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 UBL4BQ8N7F7 174 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 C1orf131Q8NDD1 294 aaKnown RBP12.86□□□□□ -0.35
CTSD-208ENST00000636843 TMIEQ8NEW7 156 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 ZNF653Q96CK0 615 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 KLHDC7BQ96G42 594 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 DCBLD2Q96PD2 775 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 C2orf49Q9BVC5 232 aaPredicted RBP12.86□□□□□ -0.35
CTSD-208ENST00000636843 SIK2Q9H0K1 926 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 WDCPQ9H6R7 721 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 SYNCQ9H7C4 482 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 ARHGEF38Q9NXL2 777 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 DMGDHQ9UI17 866 aaKnown RBP12.86□□□□□ -0.35
CTSD-208ENST00000636843 ALG6Q9Y672 507 aa12.86□□□□□ -0.35
CTSD-208ENST00000636843 ARID1BQ8NFD5 2236 aaPredicted RBP12.85□□□□□ -0.35
CTSD-208ENST00000636843 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 EIF4E1BA6NMX2 242 aaKnown RBP12.85□□□□□ -0.35
CTSD-208ENST00000636843 BNIP3LO60238 219 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 F9P00740 461 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 SRCP12931 536 aa12.85□□□□□ -0.35
CTSD-208ENST00000636843 UNGP13051 313 aaPredicted RBP12.85□□□□□ -0.35
CTSD-208ENST00000636843 ACP1P24666 158 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms