RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 C5orf22Q49AR2 442 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 PHF19Q5T6S3 580 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 RESP18Q5W5W9 173 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 SPRED1Q7Z699 444 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 HID1Q8IV36 788 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 DCAF4L2Q8NA75 395 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 RAB7BQ96AH8 199 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 HEPHQ9BQS7 1158 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 SEMA6CQ9H3T2 930 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 ITM2BQ9Y287 266 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 TOR1BO14657 336 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 NKX2-8O15522 239 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 CNTN5O94779 1100 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 RHOCP08134 193 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 KRT7P08729 469 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 CTSEP14091 401 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 PNLIPP16233 465 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 UGT1A3P35503 534 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 GGCXP38435 758 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 GPD2P43304 727 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 ACADSBP45954 432 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 UQCRFS1P47985 274 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 MLLT10P55197 1068 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 RIPPLY3P57055 190 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 YWHAZP63104 245 aaKnown RBP18.43■□□□□ 0.54
CLN6-212ENST00000636020 C8orf34Q49A92 452 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 LACTB2Q53H82 288 aaPredicted RBP18.43■□□□□ 0.54
CLN6-212ENST00000636020 FHL5Q5TD97 284 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 VPS36Q86VN1 386 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 GKN2Q86XP6 184 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 SSC4DQ8WTU2 575 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 TSACCQ96A04 125 aaPredicted RBP18.43■□□□□ 0.54
CLN6-212ENST00000636020 MBNL1Q9NR56 388 aaKnown RBP18.43■□□□□ 0.54
CLN6-212ENST00000636020 MAPK8IP1Q9UQF2 711 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 PCDHB4Q9Y5E5 795 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 PCDHGA3Q9Y5H0 932 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 HS3ST4Q9Y661 456 aa18.43■□□□□ 0.54
CLN6-212ENST00000636020 A0A0D9SEW6 157 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 PRR19A6NJB7 356 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 NEMP1O14524 444 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 POU3F2P20265 443 aaPredicted RBP18.42■□□□□ 0.54
CLN6-212ENST00000636020 LRMPQ12912 555 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 ALG11Q2TAA5 492 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 ZCWPW2Q504Y3 356 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 EFHC2Q5JST6 749 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 CERCAMQ5T4B2 595 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 PMEPA1Q969W9 287 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 SLC45A3Q96JT2 553 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 ZNF396Q96N95 335 aaPredicted RBP18.42■□□□□ 0.54
CLN6-212ENST00000636020 TAAR9Q96RI9 348 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 THAP9Q9H5L6 903 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 FAM204AQ9H8W3 233 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 DDIT4Q9NX09 232 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 AKAP7Q9P0M2 348 aaPredicted RBP18.42■□□□□ 0.54
CLN6-212ENST00000636020 MED13Q9UHV7 2174 aa18.42■□□□□ 0.54
CLN6-212ENST00000636020 SYNJ2BP-COX16A0A087WUM0 186 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 C16orf96A6NNT2 1141 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 CAPN5O15484 640 aaPredicted RBP18.41■□□□□ 0.54
CLN6-212ENST00000636020 RASGRP1O95267 797 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 CCNHP51946 323 aaPredicted RBP18.41■□□□□ 0.54
CLN6-212ENST00000636020 CDK17Q00537 523 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 TAF5Q15542 800 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 ALFQ53S48 1182 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 CARD16Q5EG05 197 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 ZNF787Q6DD87 383 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 CAPRIN2Q6IMN6 1127 aaKnown RBP18.41■□□□□ 0.54
CLN6-212ENST00000636020 OGFOD3Q6PK18 319 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 CACNA2D3Q8IZS8 1091 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 PCDH20Q8N6Y1 951 aaKnown RBP18.41■□□□□ 0.54
CLN6-212ENST00000636020 SLC4A5Q9BY07 1137 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 CEP44Q9C0F1 390 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 COX16Q9P0S2 106 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 PCDHA7Q9UN72 937 aa18.41■□□□□ 0.54
CLN6-212ENST00000636020 RNF224P0DH78 156 aa18.4■□□□□ 0.54
CLN6-212ENST00000636020 EPB41P11171 864 aaKnown RBP18.4■□□□□ 0.54
CLN6-212ENST00000636020 FGF3P11487 239 aaPredicted RBP18.4■□□□□ 0.54
CLN6-212ENST00000636020 PEX5P50542 639 aa18.4■□□□□ 0.54
CLN6-212ENST00000636020 DNA2P51530 1060 aa18.4■□□□□ 0.54
CLN6-212ENST00000636020 MTA1Q13330 715 aa18.4■□□□□ 0.54
CLN6-212ENST00000636020 RD3Q7Z3Z2 195 aa18.4■□□□□ 0.54
CLN6-212ENST00000636020 SETD3Q86TU7 594 aaPredicted RBP18.4■□□□□ 0.54
CLN6-212ENST00000636020 GUF1Q8N442 669 aaKnown RBP18.4■□□□□ 0.54
CLN6-212ENST00000636020 TP53I13Q8NBR0 393 aaPredicted RBP18.4■□□□□ 0.54
CLN6-212ENST00000636020 STK32AQ8WU08 396 aa18.4■□□□□ 0.54
CLN6-212ENST00000636020 APOBEC4Q8WW27 367 aaKnown RBP18.4■□□□□ 0.54
CLN6-212ENST00000636020 MED15Q96RN5 788 aa18.4■□□□□ 0.54
CLN6-212ENST00000636020 LRIT1Q9P2V4 623 aa18.4■□□□□ 0.54
CLN6-212ENST00000636020 DAAM1Q9Y4D1 1078 aa18.4■□□□□ 0.54
CLN6-212ENST00000636020 E5RJQ4 531 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 HGSO14964 777 aaPredicted RBP18.39■□□□□ 0.53
CLN6-212ENST00000636020 AREL1O15033 823 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 DUX1O43812 170 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 PAGE1O75459 146 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 RHOBTB3O94955 611 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 GNLYP22749 145 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 SERPINH1P50454 418 aaKnown RBP18.39■□□□□ 0.53
CLN6-212ENST00000636020 B4GALNT1Q00973 533 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 SLC20A2Q08357 652 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 EDRF1Q3B7T1 1238 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 TCERG1LQ5VWI1 586 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms