RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 PRR23BQ6ZRT6 265 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ASRGL1Q7L266 308 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ENDOVQ8N8Q3 282 aaKnown RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ICA1LQ8NDH6 482 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 BRSK1Q8TDC3 778 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ATP6V1E2Q96A05 226 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ZBTB10Q96DT7 871 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 C19orf43Q9BQ61 176 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 CDHR5Q9HBB8 845 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ATP13A1Q9HD20 1204 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 OXSMQ9NWU1 459 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 GGT7Q9UJ14 662 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 TCRBV7S3A2A0A539 114 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 RPP40O75818 363 aaKnown RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 PDE1CQ14123 709 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ARHGAP15Q53QZ3 475 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 FSTL4Q6MZW2 842 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 FKBP9P1Q75LS8 142 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 TSPEARQ8WU66 669 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF558Q96NG5 402 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 PANX3Q96QZ0 392 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SNNO75324 88 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 BANF1O75531 89 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 HAPLN1P10915 354 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 IL10P22301 178 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 MIB1Q86YT6 1006 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 CELF6Q96J87 481 aaKnown RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 RMDN2Q96LZ7 410 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 PRKAG2Q9UGJ0 569 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 POLG2Q9UHN1 485 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 NDUFAF1Q9Y375 327 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ILVBLA1L0T0 632 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 TP73O15350 636 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 DLDP09622 509 aaKnown RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 GCAP28676 217 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 CCL14Q16627 93 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SAMD4BQ5PRF9 694 aaKnown RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SYCP2LQ5T4T6 812 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 CLYBLQ8N0X4 340 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SLC26A7Q8TE54 656 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 TMEM40Q8WWA1 233 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 LPPQ93052 612 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SKA1Q96BD8 255 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 PIWIL1Q96J94 861 aaKnown RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 PTPN18Q99952 460 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 UTP6Q9NYH9 597 aaKnown RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SH3BP1Q9Y3L3 701 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 KIF13BQ9NQT8 1826 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 KPNA5O15131 536 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 NOL3O60936 208 aaKnown RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ADAMTS4O75173 837 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 HIST1H2AGP0C0S8 130 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 HIST1H2ADP20671 130 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 TACR2P21452 398 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 XPAP23025 273 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 RHOAP61586 193 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 GRIK2Q13002 908 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ADAM32Q8TC27 787 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 CLEC4CQ8WTT0 213 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ZNF333Q96JL9 665 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 HIST1H2AHQ96KK5 128 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 HIST1H2AJQ99878 128 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SH3GL1Q99961 368 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 H2AFJQ9BTM1 129 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 RHOBTB2Q9BYZ6 727 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 NUF2Q9BZD4 464 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 MUC3BQ9H195 1237 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 EBF2Q9HAK2 575 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SCUBE2Q9NQ36 999 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ME2P23368 584 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 MAPK1P28482 360 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 NDUFV1P49821 464 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SNX30Q5VWJ9 437 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 FUT10Q6P4F1 479 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 BNIPLQ7Z465 357 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 CNTN4Q8IWV2 1026 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 KLHDC9Q8NEP7 349 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 OR56A4Q8NGH8 313 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 DNAJB8Q8NHS0 232 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 MLPHQ9BV36 600 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 CATSPERZQ9NTU4 200 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 MARCOQ9UEW3 520 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 L3MBTL1Q9Y468 752 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 GOLGA8TH3BQL2 631 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 SUPT7LO94864 414 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 PIGNO95427 931 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 VAV1P15498 845 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 KCNA4P22459 653 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 CCNG1P51959 295 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 KCNJ2P63252 427 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 DSG1Q02413 1049 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 MGAT3Q09327 533 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 RNF219Q5W0B1 726 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 PYROXD2Q8N2H3 581 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 ACTRT2Q8TDY3 377 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 MZB1Q8WU39 189 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 TRIB2Q92519 343 aa4.6□□□□□ -1.67
SCN1A-210ENST00000635776 C6orf203Q9P0P8 240 aaPredicted RBP4.6□□□□□ -1.67
SCN1A-210ENST00000635776 FER1L6Q2WGJ9 1857 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms