RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 IGLV3-10A0A075B6K4 115 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 C16orf96A6NNT2 1141 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 ZMPSTE24O75844 475 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 ERBB2P04626 1255 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 SFTPCP11686 197 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 CD44P16070 742 aaKnown RBP20.46■□□□□ 0.87
TARDBP-228ENST00000629725 ITGB6P18564 788 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 PPP1R2P41236 205 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 ABL2P42684 1182 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 YPEL5P62699 121 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 ARF5P84085 180 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 SRSF6Q13247 344 aaKnown RBP20.46■□□□□ 0.87
TARDBP-228ENST00000629725 ACBD5Q5T8D3 534 aaPredicted RBP20.46■□□□□ 0.87
TARDBP-228ENST00000629725 TTI2Q6NXR4 508 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 ARL10Q8N8L6 244 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 ZNF397Q8NF99 534 aaPredicted RBP20.46■□□□□ 0.87
TARDBP-228ENST00000629725 GFM1Q96RP9 751 aaKnown RBP20.46■□□□□ 0.87
TARDBP-228ENST00000629725 NPY6RQ99463 290 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 FOXP3Q9BZS1 431 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 SYNCQ9H7C4 482 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 GULP1Q9UBP9 304 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 STAP1Q9ULZ2 295 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 PCDHGC3Q9UN70 934 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 ITM2BQ9Y287 266 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 FCF1Q9Y324 198 aaKnown RBP20.46■□□□□ 0.87
TARDBP-228ENST00000629725 PAXBP1Q9Y5B6 917 aa20.46■□□□□ 0.87
TARDBP-228ENST00000629725 DOPEY2Q9Y3R5 2298 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 BECN2A8MW95 431 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 SRGAP2O75044 1071 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 GNA14O95837 355 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 FAM87AP0C7U9 286 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 LIPCP11150 499 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 HGFP14210 728 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 TFE3P19532 575 aaPredicted RBP20.45■□□□□ 0.86
TARDBP-228ENST00000629725 PPARDQ03181 441 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 C1QBPQ07021 282 aaKnown RBP20.45■□□□□ 0.86
TARDBP-228ENST00000629725 KLHL10Q6JEL2 608 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 MACC1Q6ZN28 852 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 C1orf131Q8NDD1 294 aaKnown RBP20.45■□□□□ 0.86
TARDBP-228ENST00000629725 SCG3Q8WXD2 468 aaKnown RBP20.45■□□□□ 0.86
TARDBP-228ENST00000629725 ARHGEF26Q96DR7 871 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 FAM81BQ96LP2 452 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 TM6SF2Q9BZW4 377 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.45■□□□□ 0.86
TARDBP-228ENST00000629725 SEPT10Q9P0V9 454 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 RABGEF1Q9UJ41 708 aa20.45■□□□□ 0.86
TARDBP-228ENST00000629725 UNC13CQ8NB66 2214 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 D6RAR5 112 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 F9P00740 461 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 JMJD7P0C870 316 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 GKP32189 559 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 IGFALSP35858 605 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 EIF4A3P38919 411 aaKnown RBP20.44■□□□□ 0.86
TARDBP-228ENST00000629725 SULT1E1P49888 294 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 RNASE9P60153 205 aaKnown RBP20.44■□□□□ 0.86
TARDBP-228ENST00000629725 DEUP1Q05D60 604 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 ARHGAP44Q17R89 818 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 ZNF805Q5CZA5 627 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 GJB7Q6PEY0 223 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 ZNF574Q6ZN55 896 aaPredicted RBP20.44■□□□□ 0.86
TARDBP-228ENST00000629725 VPS36Q86VN1 386 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 RYBPQ8N488 228 aaPredicted RBP20.44■□□□□ 0.86
TARDBP-228ENST00000629725 CCDC74AQ96AQ1 378 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 PGAP3Q96FM1 320 aaPredicted RBP20.44■□□□□ 0.86
TARDBP-228ENST00000629725 SEMA3CQ99985 751 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 TMPRSS4Q9NRS4 437 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 SIRPGQ9P1W8 387 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 HOOK1Q9UJC3 728 aaKnown RBP20.44■□□□□ 0.86
TARDBP-228ENST00000629725 ACTL7AQ9Y615 435 aa20.44■□□□□ 0.86
TARDBP-228ENST00000629725 BICDL2A1A5D9 508 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 TOR1BO14657 336 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 NVLO15381 856 aaKnown RBP20.43■□□□□ 0.86
TARDBP-228ENST00000629725 CELA2BP08218 269 aaPredicted RBP20.43■□□□□ 0.86
TARDBP-228ENST00000629725 BLKP51451 505 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 MARSP56192 900 aaKnown RBP20.43■□□□□ 0.86
TARDBP-228ENST00000629725 CCL7P80098 99 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 GNA12Q03113 381 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 ELOCQ15369 112 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 PTPN20Q4JDL3 420 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 MANEAQ5SRI9 462 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 FOXR2Q6PJQ5 311 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 LVRNQ6Q4G3 990 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 ZDHHC17Q8IUH5 632 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 PLPP6Q8IY26 295 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 SDR16C5Q8N3Y7 309 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 FSTL5Q8N475 847 aaPredicted RBP20.43■□□□□ 0.86
TARDBP-228ENST00000629725 ZSCAN1Q8NBB4 408 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 KYQ8NBH2 561 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 OR6K2Q8NGY2 324 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 NELFBQ8WX92 580 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 NT5C3BQ969T7 300 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 ISG20Q96AZ6 181 aaKnown RBP20.43■□□□□ 0.86
TARDBP-228ENST00000629725 TMEM74Q96NL1 305 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 C1QTNF7Q9BXJ2 289 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 CPEB1Q9BZB8 566 aaKnown RBP20.43■□□□□ 0.86
TARDBP-228ENST00000629725 ZNF212Q9UDV6 495 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 PISDQ9UG56 409 aa20.43■□□□□ 0.86
TARDBP-228ENST00000629725 TM7SF2O76062 418 aa20.42■□□□□ 0.86
TARDBP-228ENST00000629725 CD160O95971 181 aa20.42■□□□□ 0.86
TARDBP-228ENST00000629725 RPLP0P05388 317 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms