RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.38□□□□□ -1.71
ATRX-209ENST00000623242 ZCWPW1Q9H0M4 648 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 TOR3AQ9H497 397 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 SAP30LQ9HAJ7 183 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 IL17RBQ9NRM6 502 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 EXOC1Q9NV70 894 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 ARGLU1Q9NWB6 273 aaPredicted RBP4.38□□□□□ -1.71
ATRX-209ENST00000623242 SAGE1Q9NXZ1 904 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 MTMR4Q9NYA4 1195 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 NYAP2Q9P242 653 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 DAPP1Q9UN19 280 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 MYO5AQ9Y4I1 1855 aaKnown RBP4.38□□□□□ -1.71
ATRX-209ENST00000623242 KDM3AQ9Y4C1 1321 aa4.38□□□□□ -1.71
ATRX-209ENST00000623242 UTRNP46939 3433 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 PSME4Q14997 1843 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CCL15-CCL14A0A0B4J2E2 113 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 A0A0U1RQG5 324 aaPredicted RBP4.37□□□□□ -1.71
ATRX-209ENST00000623242 GXYLT2A0PJZ3 443 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 VWA3AA6NCI4 1184 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 C19orf81C9J6K1 198 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 TMEM232C9JQI7 657 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 F5H6K3 240 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CES2O00748 559 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CTIFO43310 598 aaKnown RBP4.37□□□□□ -1.71
ATRX-209ENST00000623242 FLOT1O75955 427 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CTDNEP1O95476 244 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CER1O95813 267 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 MBPP02686 304 aaPredicted RBP4.37□□□□□ -1.71
ATRX-209ENST00000623242 CETPP11597 493 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 SKILP12757 684 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CD19P15391 556 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CREB1P16220 341 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 DRD1P21728 446 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 DRD4P21917 467 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 AKT1P31749 480 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 ACVRL1P37023 503 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 GDF5P43026 501 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 RARRES1P49788 294 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CCT8P50990 548 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 ZNF75DP51815 510 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 PRKAA2P54646 552 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 BACE1P56817 501 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 KLRC3Q07444 240 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 KLF10Q13118 480 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 PPIL2Q13356 520 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 PDIA5Q14554 519 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CALCRLQ16602 461 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CCL15Q16663 113 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 ST3GAL2Q16842 350 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 DEFB115Q30KQ5 88 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 RNASE12Q5GAN4 147 aaKnown RBP4.37□□□□□ -1.71
ATRX-209ENST00000623242 PLAC9Q5JTB6 97 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 WDR78Q5VTH9 848 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 RINT1Q6NUQ1 792 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 RGMBQ6NW40 437 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 FAM173BQ6P4H8 233 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 RBM43Q6ZSC3 357 aaKnown RBP4.37□□□□□ -1.71
ATRX-209ENST00000623242 PTCHD4Q6ZW05 846 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 FASTKD5Q7L8L6 764 aaKnown RBP4.37□□□□□ -1.71
ATRX-209ENST00000623242 CCDC186Q7Z3E2 898 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 WDR53Q7Z5U6 358 aaPredicted RBP4.37□□□□□ -1.71
ATRX-209ENST00000623242 NEK8Q86SG6 692 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 LUZP1Q86V48 1076 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CNGA4Q8IV77 575 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 SLC44A2Q8IWA5 706 aaPredicted RBP4.37□□□□□ -1.71
ATRX-209ENST00000623242 GALNT15Q8N3T1 639 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.37□□□□□ -1.71
ATRX-209ENST00000623242 LPAR1Q92633 364 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 DHX58Q96C10 678 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CCDC51Q96ER9 411 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 MACROD1Q9BQ69 325 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 PAAF1Q9BRP4 392 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 TTPALQ9BTX7 342 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 NUP58Q9BVL2 599 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 PANK2Q9BZ23 570 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 RPAP3Q9H6T3 665 aaPredicted RBP4.37□□□□□ -1.71
ATRX-209ENST00000623242 VCPKMTQ9H867 229 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 PSTPIP2Q9H939 334 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 VPS45Q9NRW7 570 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 BARHL2Q9NY43 387 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 VPS54Q9P1Q0 977 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 LRWD1Q9UFC0 647 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 ZNF112Q9UJU3 913 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 ING1Q9UK53 422 aaPredicted RBP4.37□□□□□ -1.71
ATRX-209ENST00000623242 AMFRQ9UKV5 643 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 ADAMTS5Q9UNA0 930 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 KCNJ14Q9UNX9 436 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 CNTN6Q9UQ52 1028 aa4.37□□□□□ -1.71
ATRX-209ENST00000623242 SSC5DA1L4H1 1573 aa4.36□□□□□ -1.71
ATRX-209ENST00000623242 LOC105369274A0A096LPK9 316 aa4.36□□□□□ -1.71
ATRX-209ENST00000623242 LOC102723532A0A0G2JNH3 316 aa4.36□□□□□ -1.71
ATRX-209ENST00000623242 A0A1W2PRG0 241 aa4.36□□□□□ -1.71
ATRX-209ENST00000623242 KIF28PB7ZC32 967 aa4.36□□□□□ -1.71
ATRX-209ENST00000623242 B9A039 149 aa4.36□□□□□ -1.71
ATRX-209ENST00000623242 M0QYT0 321 aa4.36□□□□□ -1.71
ATRX-209ENST00000623242 DYNC1I1O14576 645 aa4.36□□□□□ -1.71
ATRX-209ENST00000623242 CXCL11O14625 94 aa4.36□□□□□ -1.71
ATRX-209ENST00000623242 WDR46O15213 610 aaKnown RBP4.36□□□□□ -1.71
ATRX-209ENST00000623242 SUV39H1O43463 412 aa4.36□□□□□ -1.71
ATRX-209ENST00000623242 PRAMEF2O60811 474 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms