RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 TCEAL1Q15170 157 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 SETMARQ53H47 684 aaPredicted RBP14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 SLC45A4Q5BKX6 768 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 KIAA1328Q86T90 577 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 TRIM69Q86WT6 500 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 TSEN2Q8NCE0 465 aaKnown RBP14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 PCDH19Q8TAB3 1148 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 FAM71BQ8TC56 605 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 RAPGEF5Q92565 580 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 SKA1Q96BD8 255 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 SLC6A18Q96N87 628 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 ZNF830Q96NB3 372 aaPredicted RBP14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 ZNF599Q96NL3 588 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 MAK16Q9BXY0 300 aaKnown RBP14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 SEPT3Q9UH03 358 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 SLCO1B1Q9Y6L6 691 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 A0A0A6YYK5 440 aaPredicted RBP14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 A0A1W2PQU0 124 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 INSIG1O15503 277 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 LATO43561 262 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 MFSD11O43934 449 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 BUB1BO60566 1050 aaPredicted RBP14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 OPHN1O60890 802 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 NEBLO76041 1014 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 MAP3K6O95382 1288 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 PIGNO95427 931 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 CER1O95813 267 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 NUDT1P36639 197 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 GRIA4P48058 902 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 HADHBP55084 474 aaKnown RBP14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 RACK1P63244 317 aaKnown RBP14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 LRRC38Q5VT99 294 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 NCBP2-AS2Q69YL0 99 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 NEK5Q6P3R8 708 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 IL27RAQ6UWB1 636 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 LAYNQ6UX15 382 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 RAD9BQ6WBX8 426 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 DAAM2Q86T65 1068 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 SRLQ86TD4 932 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 TTC7BQ86TV6 843 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 HORMAD1Q86X24 394 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 ACRBPQ8NEB7 543 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 OR2I1PQ8NGU4 316 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 C1orf216Q8TAB5 229 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 KLK6Q92876 244 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 RAB7BQ96AH8 199 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 RNF25Q96BH1 459 aaPredicted RBP14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 FEM1CQ96JP0 617 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 DDX56Q9NY93 547 aaKnown RBP14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 DMTF1Q9Y222 760 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 ANKRD6Q9Y2G4 727 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 CACNA1EQ15878 2313 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 ADAMTS9Q9P2N4 1935 aa14.15□□□□□ -0.14
PCDHGC3-208ENST00000622836 SLC31A1O15431 190 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 MAFKO60675 156 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 PRLRP16471 622 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 MX2P20592 715 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 CD38P28907 300 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 SERPINA4P29622 427 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 HSPA9P38646 679 aaKnown RBP14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 SCNN1BP51168 640 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 GSDMDP57764 484 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 RPS21P63220 83 aaKnown RBP14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 SLC10A7Q0GE19 358 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 PAFAH1B3Q15102 231 aaKnown RBP14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 KIF19Q2TAC6 998 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 LRRC73Q5JTD7 316 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 MARC1Q5VT66 337 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 NAPEPLDQ6IQ20 393 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 TIGD7Q6NT04 549 aaPredicted RBP14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 RFX6Q8HWS3 928 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 LRRC49Q8IUZ0 686 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 TXLNBQ8N3L3 684 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 FAF2Q96CS3 445 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 RNF157Q96PX1 679 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 TUBGCP5Q96RT8 1024 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 MYOCQ99972 504 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 CPEB1Q9BZB8 566 aaKnown RBP14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 GOLPH3Q9H4A6 298 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 GAREM1Q9H706 876 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 ATP13A3Q9H7F0 1226 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 EBF2Q9HAK2 575 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 FADS3Q9Y5Q0 445 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 ALG6Q9Y672 507 aa14.14□□□□□ -0.15
PCDHGC3-208ENST00000622836 PRAMEF26H0Y7S4 382 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 APOL1O14791 398 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 VILLO15195 856 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 PSTPIP1O43586 416 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 TSPAN6O43657 245 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 GARSP41250 739 aaKnown RBP14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 ABL2P42684 1182 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 MMP13P45452 471 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 RGRP47804 291 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 CSNK1DP48730 415 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 VAV2P52735 878 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 DYNLT1P63172 113 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 GBE1Q04446 702 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 BCL2L1Q07817 233 aa14.13□□□□□ -0.15
PCDHGC3-208ENST00000622836 NSUN2Q08J23 767 aaKnown RBP eCLIP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms