RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 GPLD1P80108 840 aa8□□□□□ -1.13
VPS11-209ENST00000622309 BNIP2Q12982 314 aa8□□□□□ -1.13
VPS11-209ENST00000622309 TRIM25Q14258 630 aaKnown RBP8□□□□□ -1.13
VPS11-209ENST00000622309 DALRD3Q5D0E6 543 aaKnown RBP8□□□□□ -1.13
VPS11-209ENST00000622309 ATAD3CQ5T2N8 411 aa8□□□□□ -1.13
VPS11-209ENST00000622309 CFAP161Q6P656 301 aa8□□□□□ -1.13
VPS11-209ENST00000622309 DNAJB7Q7Z6W7 309 aaPredicted RBP8□□□□□ -1.13
VPS11-209ENST00000622309 HORMAD1Q86X24 394 aa8□□□□□ -1.13
VPS11-209ENST00000622309 SFRP1Q8N474 314 aa8□□□□□ -1.13
VPS11-209ENST00000622309 TMEM35BQ8NCS4 154 aa8□□□□□ -1.13
VPS11-209ENST00000622309 RP9Q8TA86 221 aaKnown RBP8□□□□□ -1.13
VPS11-209ENST00000622309 LRRC20Q8TCA0 184 aa8□□□□□ -1.13
VPS11-209ENST00000622309 CSF3RQ99062 836 aa8□□□□□ -1.13
VPS11-209ENST00000622309 TM9SF2Q99805 663 aa8□□□□□ -1.13
VPS11-209ENST00000622309 RUSC1Q9BVN2 902 aa8□□□□□ -1.13
VPS11-209ENST00000622309 NMRK2Q9NPI5 230 aa8□□□□□ -1.13
VPS11-209ENST00000622309 KLHL11Q9NVR0 708 aa8□□□□□ -1.13
VPS11-209ENST00000622309 MAT2BQ9NZL9 334 aa8□□□□□ -1.13
VPS11-209ENST00000622309 MAD2L2Q9UI95 211 aa8□□□□□ -1.13
VPS11-209ENST00000622309 DRG1Q9Y295 367 aaKnown RBP8□□□□□ -1.13
VPS11-209ENST00000622309 AP3M1Q9Y2T2 418 aa8□□□□□ -1.13
VPS11-209ENST00000622309 BCORQ6W2J9 1755 aa8□□□□□ -1.13
VPS11-209ENST00000622309 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 KBTBD13C9JR72 458 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 PIK3R2O00459 728 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 ACOT8O14734 319 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 SHOXO15266 292 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 GAS2O43903 313 aaKnown RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 SLITRK3O94933 977 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 NDUFV2P19404 249 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CBX5P45973 191 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 SERPINH1P50454 418 aaKnown RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 ATN1P54259 1190 aaPredicted RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 SEC13P55735 322 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 RHDQ02161 417 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 POLD3Q15054 466 aaPredicted RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 ACAD10Q6JQN1 1059 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 ZNF544Q6NX49 715 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 ZNF773Q6PK81 442 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 SLC47A2Q86VL8 602 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 LURAP1LQ8IV03 231 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 FBXL6Q8N531 539 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 C2orf69Q8N8R5 385 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 APBB2Q92870 758 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 GIMAP5Q96F15 307 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 DMRTB1Q96MA1 342 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 REEP2Q9BRK0 252 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 TINF2Q9BSI4 451 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 TEX13BQ9BXU2 312 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 YTHDF1Q9BYJ9 559 aaKnown RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 LHPPQ9H008 270 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 RNPEPQ9H4A4 650 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 IL17RBQ9NRM6 502 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 FARSBQ9NSD9 589 aaKnown RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 IFT80Q9P2H3 777 aaPredicted RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 ZNF219Q9P2Y4 722 aaPredicted RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 DPP7Q9UHL4 492 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 PCDHGC3Q9UN70 934 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 PCDHB4Q9Y5E5 795 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 TRAV6A0A075B6T7 132 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 NOS1APO75052 506 aaPredicted RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 AVILO75366 819 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 OR7A10O76100 309 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 ALDH1A2O94788 518 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CPNE6O95741 557 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 SERPINE1P05121 402 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 FGRP09769 529 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 POU2F1P14859 743 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 MAGP20916 626 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 ARNTP27540 789 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CD40LGP29965 261 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 SLC7A1P30825 629 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 FMO1Q01740 532 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 BST2Q10589 180 aaKnown RBP7.99□□□□□ -1.13
VPS11-209ENST00000622309 PTP4A2Q12974 167 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 SLC12A1Q13621 1099 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 PPP1R3AQ16821 1122 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CLVS2Q5SYC1 327 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CCNYL2Q5T2Q4 361 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 DESI1Q6ICB0 168 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 PRR5LQ6MZQ0 368 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 MAMDC4Q6UXC1 1216 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 LINC00299Q6ZSB3 139 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 MAVSQ7Z434 540 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 LACC1Q8IV20 430 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 KATNAL2Q8IYT4 538 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 DHRSXQ8N5I4 330 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 PACRGLQ8N7B6 248 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 HERVK_113Q902F9 699 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 SEPT8Q92599 483 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 ZNF566Q969W8 418 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CCDC120Q96HB5 630 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 FBXL20Q96IG2 436 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 C17orf62Q9BQA9 187 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 ADAMTS10Q9H324 1103 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 CD320Q9NPF0 282 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 PRKAB1Q9Y478 270 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 C16orf96A6NNT2 1141 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 E7ENX8 843 aa7.99□□□□□ -1.13
VPS11-209ENST00000622309 H0YC42 278 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms