RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 PIP4K2CQ8TBX8 421 aa13.81□□□□□ -0.2
NEK3-210ENST00000620675 RLN3Q8WXF3 142 aa13.81□□□□□ -0.2
NEK3-210ENST00000620675 OR8D1Q8WZ84 308 aa13.81□□□□□ -0.2
NEK3-210ENST00000620675 ARRDC3Q96B67 414 aa13.81□□□□□ -0.2
NEK3-210ENST00000620675 SMIM14Q96QK8 99 aa13.81□□□□□ -0.2
NEK3-210ENST00000620675 RBM15Q96T37 977 aaKnown RBP eCLIP13.81□□□□□ -0.2
NEK3-210ENST00000620675 HEPHQ9BQS7 1158 aa13.81□□□□□ -0.2
NEK3-210ENST00000620675 PRMT8Q9NR22 394 aaPredicted RBP13.81□□□□□ -0.2
NEK3-210ENST00000620675 KLHL8Q9P2G9 620 aaPredicted RBP13.81□□□□□ -0.2
NEK3-210ENST00000620675 IL36AQ9UHA7 158 aa13.81□□□□□ -0.2
NEK3-210ENST00000620675 INVSQ9Y283 1065 aa13.81□□□□□ -0.2
NEK3-210ENST00000620675 PCDHGC4Q9Y5F7 938 aa13.81□□□□□ -0.2
NEK3-210ENST00000620675 ZNF500O60304 480 aaPredicted RBP13.8□□□□□ -0.2
NEK3-210ENST00000620675 IFNB1P01574 187 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 DRD3P35462 400 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 CD86P42081 329 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 MAGEA9P43362 315 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 RECQLP46063 649 aaPredicted RBP13.8□□□□□ -0.2
NEK3-210ENST00000620675 CCR3P51677 355 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 CSTF1Q05048 431 aaKnown RBP13.8□□□□□ -0.2
NEK3-210ENST00000620675 OLIG2Q13516 323 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 TRIP13Q15645 432 aaPredicted RBP13.8□□□□□ -0.2
NEK3-210ENST00000620675 CST6Q15828 149 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 SYCP2LQ5T4T6 812 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 FAXCQ5TGI0 409 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 ALG1LQ6GMV1 187 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 NCEH1Q6PIU2 408 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 PID1Q7Z2X4 250 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 C12orf50Q8NA57 414 aaPredicted RBP13.8□□□□□ -0.2
NEK3-210ENST00000620675 GLOD4Q9HC38 313 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 PI4KAP42356 2102 aa13.8□□□□□ -0.2
NEK3-210ENST00000620675 KPNA3O00505 521 aaPredicted RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 LAMTOR5O43504 91 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 POP4O95707 220 aaKnown RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 PRKCGP05129 697 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 ITGAVP06756 1048 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 ITIH2P19823 946 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 PSMB4P28070 264 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 COILP38432 576 aaPredicted RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 C2orf54Q08AI8 447 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 NSUN2Q08J23 767 aaKnown RBP eCLIP13.79□□□□□ -0.2
NEK3-210ENST00000620675 TRAF2Q12933 501 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 DRICH1Q6PGQ1 229 aaPredicted RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 CCDC137Q6PK04 289 aaKnown RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 MAMSTRQ6ZN01 415 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 METTL3Q86U44 580 aaKnown RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 RASSF3Q86WH2 238 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 PLPP6Q8IY26 295 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 PGBD3Q8N328 593 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 MAIP1Q8WWC4 291 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 SIPA1Q96FS4 1042 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 OXNAD1Q96HP4 312 aaPredicted RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 CCDC114Q96M63 670 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 KLHL32Q96NJ5 620 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 NUDCD1Q96RS6 583 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 POLR1EQ9GZS1 481 aaKnown RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 POLMQ9NP87 494 aaPredicted RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 SCUBE2Q9NQ36 999 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 BCCIPQ9P287 314 aaKnown RBP eCLIP13.79□□□□□ -0.2
NEK3-210ENST00000620675 CDC23Q9UJX2 597 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 A0A1W2PP55 124 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 PHF2O75151 1096 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 NEBLO76041 1014 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 METTL18O95568 372 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 PDHA1P08559 390 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 SLC8A1P32418 973 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 FNTBP49356 437 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 SKOR1P84550 965 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 SEMG2Q02383 582 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 ZNF776Q68DI1 518 aaPredicted RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 KDELC2Q7Z4H8 507 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 FAM124AQ86V42 546 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 KLHL7Q8IXQ5 586 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 KIF18AQ8NI77 898 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 RTP4Q96DX8 246 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 IMP4Q96G21 291 aaKnown RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 SPATA13Q96N96 652 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 NAP1L3Q99457 506 aaPredicted RBP13.79□□□□□ -0.2
NEK3-210ENST00000620675 MRFAP1Q9Y605 127 aa13.79□□□□□ -0.2
NEK3-210ENST00000620675 A0A0U1RQS6 177 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 C5orf60A6NFR6 353 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 KIF2AO00139 706 aaPredicted RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 TRAFD1O14545 582 aaPredicted RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 PAPSS2O95340 614 aaPredicted RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 APBB3O95704 486 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 TERF1P54274 439 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 CNTN1Q12860 1018 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 SRSF5Q13243 272 aaKnown RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 E2F5Q15329 346 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 PARS2Q7L3T8 475 aaKnown RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 BBS5Q8N3I7 341 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 IER2Q9BTL4 223 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 MLPHQ9BV36 600 aaPredicted RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 C1QTNF1Q9BXJ1 281 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 FRMD8P1Q9BZ68 369 aaPredicted RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 DRG1Q9Y295 367 aaKnown RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 MTSS1O43312 755 aa13.78□□□□□ -0.2
NEK3-210ENST00000620675 RPL22P35268 128 aaKnown RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 HSPA9P38646 679 aaKnown RBP13.78□□□□□ -0.2
NEK3-210ENST00000620675 PAFAH1B1P43034 410 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms